Gene detail information of Glyur000152s00012705 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G24860.1 | 2.00E-37 | flowering promoting factor 1 |
| NR | XP_006600348.1 | 4.30E-65 | PREDICTED: flowering-promoting factor 1-like protein 3-like [Glycine max] |
| Swissprot | tr|Q0E1D7|FLP3_ORYSJ | 3.00E-48 | Flowering-promoting factor 1-like protein 3 |
| trEMBL | tr|I1MRH5|I1MRH5_SOYBN | 2.00E-65 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G02860.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00152 | 114097 | 114423 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 58.404 |
| SRR1783600 | control | 58.979 |
| SRR1783602 | moderate drought stress | 16.020 |
| SRR1811619 | moderate drought stress | 16.112 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.248 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.202 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.118 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.329 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 67.138 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 65.471 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.022 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.612 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 191.010 |
| SRR2868004 | Drought Stress (root) | 285.923 |
| SRR2967015 | Control (root) | 442.023 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 247.018 |
| SRR9715740 | Leaf | 43.431 |
| SRR9715741 | Leaf | 165.447 |
| SRR9715739 | Root | 69.384 |
| SRR9715742 | Root | 33.443 |
| SRR9715743 | Root | 39.889 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 210.642 |
| SRR8749028 | MeJA induced 9h | 63.315 |
| SRR8749029 | MeJA induced 9h | 50.469 |
| SRR8749030 | Uninduced | 3.418 |
| SRR8749031 | Uninduced | 0.484 |
| SRR8749032 | Uninduced | 12.284 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 122.780 |
| SRR8400027 | Control - Root | 115.766 |