Gene detail information of Glyur000151s00010738 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44770.1 | 1.00E-125 | ELMO/CED-12 family protein |
| NR | XP_003529028.1 | 1.62E-174 | PREDICTED: ELMO domain-containing protein A-like isoform 1 [Glycine max] |
| trEMBL | tr|I1KJI5|I1KJI5_SOYBN | 6.00E-175 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G13700.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00151 | 138426 | 145203 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000151s00010738.1 | PF04727.8 | ELMO_CED12 | 68 | 236 | 3.90E-50 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.916 |
| SRR1783600 | control | 20.590 |
| SRR1783602 | moderate drought stress | 16.736 |
| SRR1811619 | moderate drought stress | 17.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.049 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.813 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.380 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.528 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.063 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.058 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.254 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.717 |
| SRR2868004 | Drought Stress (root) | 28.089 |
| SRR2967015 | Control (root) | 25.873 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.162 |
| SRR9715740 | Leaf | 8.032 |
| SRR9715741 | Leaf | 8.128 |
| SRR9715739 | Root | 18.561 |
| SRR9715742 | Root | 13.540 |
| SRR9715743 | Root | 13.440 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.256 |
| SRR8749028 | MeJA induced 9h | 11.593 |
| SRR8749029 | MeJA induced 9h | 9.030 |
| SRR8749030 | Uninduced | 5.032 |
| SRR8749031 | Uninduced | 3.420 |
| SRR8749032 | Uninduced | 3.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.838 |
| SRR8400027 | Control - Root | 36.143 |