Gene detail information of Glyur000150s00014599 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G58170.1 | 3.00E-51 | Disease resistance-responsive (dirigent-like protein) family protein |
| NR | XP_003529182.1 | 2.93E-96 | PREDICTED: dirigent protein 19-like [Glycine max] |
| Swissprot | tr|Q9C523|DIR19_ARATH | 1.00E-72 | Dirigent protein 19 (Precursor) |
| trEMBL | tr|K7L1Z4|K7L1Z4_SOYBN | 1.00E-96 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G19360.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00150 | 294400 | 294984 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000150s00014599.1 | PF03018.9 | Dirigent | 49 | 193 | 8.30E-54 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 52.974 |
| SRR1783600 | control | 53.694 |
| SRR1783602 | moderate drought stress | 23.732 |
| SRR1811619 | moderate drought stress | 24.471 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 73.032 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 72.076 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.191 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.368 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.813 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.893 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.043 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.526 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.312 |
| SRR2868004 | Drought Stress (root) | 32.153 |
| SRR2967015 | Control (root) | 22.524 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.270 |
| SRR9715740 | Leaf | 0.162 |
| SRR9715741 | Leaf | 0.619 |
| SRR9715739 | Root | 83.030 |
| SRR9715742 | Root | 60.000 |
| SRR9715743 | Root | 44.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.717 |
| SRR8749028 | MeJA induced 9h | 0.378 |
| SRR8749029 | MeJA induced 9h | 0.047 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 57.558 |
| SRR8400027 | Control - Root | 104.916 |