Gene detail information of Glyur000150s00014597 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G01660.1 | 4.00E-155 | |
| NR | XP_007140194.1 | 0 | hypothetical protein PHAVU_008G092000g [Phaseolus vulgaris] |
| COG | YP_003684082.1 | 4.00E-26 | Kelch repeat-containing protein [Meiothermus silvanus DSM 9946] |
| Swissprot | tr|P37707|B2_DAUCA | 4.00E-26 | B2 protein |
| trEMBL | tr|K7MTP9|K7MTP9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G43880.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00150 | 282480 | 287622 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000150s00014597.1 | PF10539.4 | Dev_Cell_Death | 41 | 169 | 2.00E-54 |
| Glyur000150s00014597.1 | PF01344.20 | Kelch_1 | 399 | 443 | 3.00E-10 |
| Glyur000150s00014597.1 | PF01344.20 | Kelch_1 | 450 | 489 | 1.20E-05 |
| Glyur000150s00014597.1 | PF01344.20 | Kelch_1 | 497 | 537 | 3.60E-11 |
| Glyur000150s00014597.1 | PF01344.20 | Kelch_1 | 540 | 584 | 6.20E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.629 |
| SRR1783600 | control | 5.492 |
| SRR1783602 | moderate drought stress | 6.362 |
| SRR1811619 | moderate drought stress | 6.289 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.480 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.242 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.434 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.306 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.993 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.973 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.636 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.587 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.970 |
| SRR2868004 | Drought Stress (root) | 5.556 |
| SRR2967015 | Control (root) | 5.544 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.656 |
| SRR9715740 | Leaf | 0.345 |
| SRR9715741 | Leaf | 0.461 |
| SRR9715739 | Root | 0.881 |
| SRR9715742 | Root | 1.579 |
| SRR9715743 | Root | 1.641 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.175 |
| SRR8749028 | MeJA induced 9h | 3.104 |
| SRR8749029 | MeJA induced 9h | 3.422 |
| SRR8749030 | Uninduced | 1.817 |
| SRR8749031 | Uninduced | 1.056 |
| SRR8749032 | Uninduced | 1.273 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.630 |
| SRR8400027 | Control - Root | 7.421 |