Gene detail information of Glyur000150s00014592 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G51660.1 | 7.00E-19 | Tautomerase/MIF superfamily protein |
| NR | XP_003552282.1 | 1.28E-36 | PREDICTED: macrophage migration inhibitory factor homolog isoform X1 [Glycine max] |
| COG | YP_001017772.1 | 2.00E-06 | ATLS1-like light-inducible protein [Prochlorococcus marinus str. MIT 9303] |
| trEMBL | tr|I1N327|I1N327_SOYBN | 5.00E-37 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G43830.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00150 | 256916 | 257300 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000150s00014592.1 | PF01187.13 | MIF | 5 | 67 | 4.70E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.067 |
| SRR1783600 | control | 11.566 |
| SRR1783602 | moderate drought stress | 8.015 |
| SRR1811619 | moderate drought stress | 8.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.396 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.284 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.504 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.116 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.141 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.660 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.541 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.794 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.472 |
| SRR2868004 | Drought Stress (root) | 33.660 |
| SRR2967015 | Control (root) | 17.850 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.018 |
| SRR9715740 | Leaf | 8.851 |
| SRR9715741 | Leaf | 12.764 |
| SRR9715739 | Root | 0.480 |
| SRR9715742 | Root | 13.073 |
| SRR9715743 | Root | 11.872 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.069 |
| SRR8749028 | MeJA induced 9h | 32.124 |
| SRR8749029 | MeJA induced 9h | 46.729 |
| SRR8749030 | Uninduced | 13.041 |
| SRR8749031 | Uninduced | 3.530 |
| SRR8749032 | Uninduced | 19.076 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.109 |
| SRR8400027 | Control - Root | 21.451 |