Gene detail information of Glyur000150s00014591 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G01650.2 | 5.00E-46 | Tautomerase/MIF superfamily protein |
| NR | KHN40694.1 | 6.92E-65 | Macrophage migration inhibitory factor like [Glycine soja] |
| COG | YP_001017772.1 | 3.00E-15 | ATLS1-like light-inducible protein [Prochlorococcus marinus str. MIT 9303] |
| trEMBL | tr|I3SVX1|I3SVX1_LOTJA | 2.00E-62 | Uncharacterized protein {ECO:0000313|EMBL:AFK44413.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00150 | 252624 | 254509 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000150s00014591.1 | PF01187.13 | MIF | 2 | 120 | 2.10E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.650 |
| SRR1783600 | control | 23.291 |
| SRR1783602 | moderate drought stress | 19.055 |
| SRR1811619 | moderate drought stress | 19.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 29.464 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 29.069 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.428 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.826 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 50.404 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 49.303 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 30.085 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 31.261 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 127.742 |
| SRR2868004 | Drought Stress (root) | 102.905 |
| SRR2967015 | Control (root) | 93.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 64.465 |
| SRR9715740 | Leaf | 87.057 |
| SRR9715741 | Leaf | 81.825 |
| SRR9715739 | Root | 25.634 |
| SRR9715742 | Root | 36.787 |
| SRR9715743 | Root | 31.485 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 97.164 |
| SRR8749028 | MeJA induced 9h | 57.388 |
| SRR8749029 | MeJA induced 9h | 81.872 |
| SRR8749030 | Uninduced | 65.306 |
| SRR8749031 | Uninduced | 52.677 |
| SRR8749032 | Uninduced | 76.004 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 73.979 |
| SRR8400027 | Control - Root | 75.128 |