Gene detail

Gene detail information of Glyur000150s00014584

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G38340.1	1.00E-25	Integrase-type DNA-binding superfamily protein
NR	XP_004492501.1	0	PREDICTED: uncharacterized protein LOC101505842 [Cicer arietinum]
Swissprot	tr\|Q8LFR2\|DRE2C_ARATH	2.00E-41	Dehydration-responsive element-binding protein 2C
trEMBL	tr\|K0GYZ0\|K0GYZ0_SOYBN	1.00E-164	DRE-binding protein 2D1 {ECO:0000313\|EMBL:AFU35564.1}

Sequence

Transcript Sequence

>Glyur000150s00014584.1
ATGAAGACTGATACCGTTTCTGGAGAAAGGAAATCACGAAAGAGACGCAGTGGTGGAAGAAGTGACTCAGTGGAAGACACACTTGAGAAGTGGAAGAAGTACAACAGGCAGCAACAACAGCAACAGCAACAACAACTTGGTGGTGGTGGTGGAGAGAATGGGGTGGAAGTGAAAGTGATTCACAAGGTNCCTGCAAAGGGGTCAAGAAAAGGGTGCATGAGAGGCAAAGGTGGTCCTCAGAATTCAGATTGCAAGTTCAGAGGNGTGAGGCAGAGGATTTGGGGAAAGTGGGTAGCTGAGATCCGTGAACCTATCAATGGTAGTAAGCATGTTGGTGAGAAAGCAAATAGGCTTTGGCTTGGTACTTTCTCAACTGCACATGNGGCTGCTCTTGCTTATGATGAAGCTGCTAGAGCCATGTATGGCCCTTGTGCCCGTTTGAACTTCCCTAATGGATCACCATCATCATCAGCATCAGCATCATCACCGTCATCCTGTGGTGGTTCTGCAGATACATTGAATGGTGGTGGGGATGATCTTGCAAAAGCTGAAGAGGATTTGGAAGGAAATCTTCTTCAACATGAAGAGAAAAAGGTTCTTTCTAAAGCCTGTGTGGCTGATGACTTGGTAGAGGAATCTAAGAAAACAGATGAGAAATGTAAGAAAACAATTCACCAACAAGGGTCTTTCAAGAGTGTTGTCGAGTCTGAAAAACATGGAGAAAATGAAAGAGGAATGGAGAGAGAATCAGAAGAGGTTTTTAAAAACTCTGGCATAGGTATGTCCTCTTGTGATACAACAAAACATGAGATTCTGGTGAAGAGTGCAGAAGAAGCAACAACAGGAAGAGAATCAGTGGAAACTTTGGAATCCTTTGAGTTGAGCTGCAACAACAACCATTATAACAACATGGTTCCAGATAGCAGCAAGCCAAGACCAAATTCTGAGGCTTATTCTCTTGCAAAGAAACACAAGGANGAAGCGATTTCTGAGATCCTGGGATTTTGTAGTGGCAACAAGTGCTCANATATCAGCAGCCACCATGCTCAGTCACAAAATGAGCAATACAAAAATGGAGAACAACAACATCTTGATGAGATCATGGAAACTGAGGTCAAGGGTTTGGAGTGCAAGCTGAGAGGCCATTCTATAGTAGAGGATTTCAATAATCTGTTNGGTGGTGGTGGCACTGTTGGACCTATTGAAAGAATGTCCCAAGTTAAGGCTTTGAACATCAATAATATTAATAACAATAAAGACTCTAAGTTGCAAGAGAAAGGGAATAATAATGGAAGTGCACTACATCATGGATTTAGTTCTGGAGGACAAGGTAGGAGGCTGTGTGATCTTTCTCAACAGCTGCAGAAACTGGGTGGTCATTGGAATAATATGCAGTTTGCAGACCTGGATGTGGGTTATGATTATAGTTTCTTAAGTCCTGATTATGATTTTGGCTTATTAGAAGAGAAGAAGTTATTAGATGTTTGTTTTTCACATATAGGATCTTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00150	218489	220444	-

Gene family

Gene family	subfamily
Transcription Factors Family	ERF

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003677 DNA binding

GO:0003700 transcription factor activity, sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000150s00014584.1	PF00847.15	AP2	84	142	5.00E-14

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.149
SRR1783600	control	0.119
SRR1783602	moderate drought stress	0.101
SRR1811619	moderate drought stress	0.149

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.591
DRR006522	Root Winter glycyrrhizin high producing strain	0.784
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.111
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.067

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.567
SRR2868004	Drought Stress (root)	3.444
SRR2967015	Control (root)	1.555

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.354
SRR9715740	Leaf	0.603
SRR9715741	Leaf	0.782
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.142

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.336
SRR8749028	MeJA induced 9h	32.592
SRR8749029	MeJA induced 9h	45.192
SRR8749030	Uninduced	2.778
SRR8749031	Uninduced	42.825
SRR8749032	Uninduced	29.143

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.150
SRR8400027	Control - Root	0.102