Gene detail information of Glyur000150s00014577 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38320.1 | 1.00E-147 | TRICHOME BIREFRINGENCE-LIKE 34 |
| NR | XP_004492495.1 | 0 | PREDICTED: uncharacterized protein LOC101504134 isoform X1 [Cicer arietinum] |
| Swissprot | tr|O80919|TBL34_ARATH | 0 | Protein trichome birefringence-like 34 |
| trEMBL | tr|G7KT84|G7KT84_MEDTR | 0 | Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein {ECO:0000313|EMBL:AES79585.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00150 | 174025 | 179373 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000150s00014577.1 | PF14416.1 | PMR5N | 103 | 157 | 9.70E-23 |
| Glyur000150s00014577.1 | PF13839.1 | PC-Esterase | 158 | 445 | 4.10E-74 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.508 |
| SRR1783600 | control | 0.426 |
| SRR1783602 | moderate drought stress | 0.061 |
| SRR1811619 | moderate drought stress | 0.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.396 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.464 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.119 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.081 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.030 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.721 |
| SRR2868004 | Drought Stress (root) | 7.351 |
| SRR2967015 | Control (root) | 6.495 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.394 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.071 |
| SRR9715742 | Root | 0.915 |
| SRR9715743 | Root | 0.687 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.268 |
| SRR8400027 | Control - Root | 6.427 |