Gene detail information of Glyur000149s00009583 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G50150.1 | 1.00E-136 | Protein of Unknown Function (DUF239) |
| NR | KHN19277.1 | 0 | hypothetical protein glysoja_012197 [Glycine soja] |
| trEMBL | tr|K7KVQ6|K7KVQ6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G19020.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00149 | 276034 | 280195 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000149s00009583.1 | PF14365.1 | DUF4409 | 144 | 220 | 7.10E-18 |
| Glyur000149s00009583.1 | PF03080.10 | DUF239 | 253 | 420 | 2.30E-60 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.358 |
| SRR1783600 | control | 0.336 |
| SRR1783602 | moderate drought stress | 0.504 |
| SRR1811619 | moderate drought stress | 0.406 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.265 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.310 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.174 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.170 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.181 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.079 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.185 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.116 |
| SRR2868004 | Drought Stress (root) | 1.040 |
| SRR2967015 | Control (root) | 1.088 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.513 |
| SRR9715740 | Leaf | 0.501 |
| SRR9715741 | Leaf | 0.271 |
| SRR9715739 | Root | 0.129 |
| SRR9715742 | Root | 0.501 |
| SRR9715743 | Root | 0.639 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.016 |
| SRR8749028 | MeJA induced 9h | 0.043 |
| SRR8749029 | MeJA induced 9h | 0.121 |
| SRR8749030 | Uninduced | 0.042 |
| SRR8749031 | Uninduced | 0.040 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.898 |
| SRR8400027 | Control - Root | 2.108 |