Gene detail information of Glyur000149s00009580 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G63040.1 | 8.00E-89 | |
| NR | XP_004501901.1 | 0 | PREDICTED: uncharacterized protein LOC101490503 [Cicer arietinum] |
| trEMBL | tr|G7J4W9|G7J4W9_MEDTR | 0 | Transmembrane protein, putative {ECO:0000313|EMBL:AES71487.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00149 | 253483 | 258750 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.687 |
| SRR1783600 | control | 9.659 |
| SRR1783602 | moderate drought stress | 9.208 |
| SRR1811619 | moderate drought stress | 9.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.861 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.720 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.734 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.566 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.987 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.312 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.651 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.761 |
| SRR2868004 | Drought Stress (root) | 12.202 |
| SRR2967015 | Control (root) | 10.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.808 |
| SRR9715740 | Leaf | 17.682 |
| SRR9715741 | Leaf | 13.068 |
| SRR9715739 | Root | 5.700 |
| SRR9715742 | Root | 8.153 |
| SRR9715743 | Root | 6.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.486 |
| SRR8749028 | MeJA induced 9h | 5.526 |
| SRR8749029 | MeJA induced 9h | 2.399 |
| SRR8749030 | Uninduced | 4.384 |
| SRR8749031 | Uninduced | 1.362 |
| SRR8749032 | Uninduced | 0.793 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.802 |
| SRR8400027 | Control - Root | 12.733 |