Gene detail information of Glyur000149s00009570.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G17990.14.00E-124tryptophan biosynthesis 1
NRXP_004501915.10PREDICTED: anthranilate phosphoribosyltransferase, chloroplastic-like isoform X1 [Cicer arietinum]
COGYP_004671386.12.00E-102anthranilate phosphoribosyltransferase [Simkania negevensis Z]
Swissprottr|Q02166|TRPD_ARATH0Anthranilate phosphoribosyltransferase, chloroplastic (Precursor)
trEMBLtr|G7J5E0|G7J5E0_MEDTR0Uncharacterized protein {ECO:0000313|EMBL:AFK40968.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00149180070183201-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K00766trpDEC:2.4.2.18Biosynthesis of amino acidsmap01230
Phenylalanine, tyrosine and tryptophan biosynthesismap00400


Gene Ontology

biological_process

GO:0000162  tryptophan biosynthetic process

GO:0008152  metabolic process


molecular_function

GO:0004048  anthranilate phosphoribosyltransferase activity

GO:0016757  transferase activity, transferring glycosyl groups



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000149s00009570.1PF02885.12Glycos_trans_3N681291.40E-16
Glyur000149s00009570.1PF00591.16Glycos_transf_31373866.40E-96


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.641
SRR1783600control23.676
SRR1783602moderate drought stress23.155
SRR1811619moderate drought stress23.499

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain35.771
DRR006520Root Summer glycyrrhizin high producing strain35.769
DRR006521Root Winter glycyrrhizin high producing strain27.576
DRR006522Root Winter glycyrrhizin high producing strain25.927
DRR006523Root Summer glycyrrhizin low producing strain27.885
DRR006524Root Summer glycyrrhizin low producing strain27.346
DRR006525Leaf Summer glycyrrhizin high producing strain53.141
DRR006526Leaf Summer glycyrrhizin high producing strain50.353

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)49.255
SRR2868004Drought Stress (root)47.608
SRR2967015Control (root)48.836

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf46.074
SRR9715740Leaf47.804
SRR9715741Leaf49.061
SRR9715739Root19.687
SRR9715742Root35.510
SRR9715743Root30.950

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h34.000
SRR8749028MeJA induced 9h40.255
SRR8749029MeJA induced 9h28.941
SRR8749030Uninduced26.643
SRR8749031Uninduced14.603
SRR8749032Uninduced14.201

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root46.768
SRR8400027Control - Root42.422

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved