Gene detail information of Glyur000149s00009568 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G62960.1 | 2.00E-104 | |
| NR | XP_006578636.1 | 0 | PREDICTED: uncharacterized protein LOC100799543 [Glycine max] |
| trEMBL | tr|I1JX83|I1JX83_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G35770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00149 | 166113 | 169230 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.892 |
| SRR1783600 | control | 3.005 |
| SRR1783602 | moderate drought stress | 1.996 |
| SRR1811619 | moderate drought stress | 2.039 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.245 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.033 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.630 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.649 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.099 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.081 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.703 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.707 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.040 |
| SRR2868004 | Drought Stress (root) | 3.831 |
| SRR2967015 | Control (root) | 4.928 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.691 |
| SRR9715740 | Leaf | 3.865 |
| SRR9715741 | Leaf | 2.565 |
| SRR9715739 | Root | 0.320 |
| SRR9715742 | Root | 3.080 |
| SRR9715743 | Root | 2.213 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.771 |
| SRR8749028 | MeJA induced 9h | 0.183 |
| SRR8749029 | MeJA induced 9h | 0.127 |
| SRR8749030 | Uninduced | 0.032 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.474 |
| SRR8400027 | Control - Root | 3.647 |