Gene detail

Gene detail information of Glyur000149s00009564

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G33320.1	2.00E-135	Glucose-6-phosphate/phosphate translocator-related
NR	XP_003527013.1	0	PREDICTED: triose phosphate/phosphate translocator, non-green plastid, chloroplastic [Glycine max]
Swissprot	tr\|P52178\|TPT2_BRAOB	0	Triose phosphate/phosphate translocator, non-green plastid, chloroplastic (Precursor)
trEMBL	tr\|I1KCF1\|I1KCF1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G19250.1}

Sequence

Transcript Sequence

>Glyur000149s00009564.1
CGTGCATCTCCTGAAAAGCATCCTCTCTTTATTTTATTTTTTTTGTGAACAATAAAGTATATTCCGTTTCAAAACACACNTCTCTCCCCGGCACACTCAAACAGTATTTTAGTGCTAGTGTTTTAAGGTATTTACCTACTCCACCAAACCTTGCTGGTGGTGACGGACACCCCGAGGGATATTTCTTCTGTCCATATATAAAAACTTAAAAAGGGTCCCCGACCAACCAACTCTGTTTAACACACGAGAGAACCGTGCTCTTGTGTTGTTGTGTTGCGTTTTCCTCATTTTCATTTTCAGTTTCAGATCTCGAAAATGCAGAGCGCGGCTTTCACTCTCTCACCTTCCCTCTCTCTTCTCCGAAACAACCTCAACAACCCTCGGAGACATTCTCTCCTTTGCGTCCGTAGCGAAGCCGCAAACCCCAATGGCGCTTCTCCTTCTCCTTCTTCATCTTCCTCTTCATCTTCCTTCACTCGCCGATCCTGGTGCCTCGCTCCTTCCTCTTCCTTCAAATTCAGACCCCTCCCTCTCCTTTCAACTACCTCCTCCGATCCCTCACCTCCACGCGCCGCCTCCGTCTCCGACAGCGCCGGCTCTGCCGACTCCGGTTCCTTATTCAAAACTCTCGAGCTCGGTGCCTTGTTTGGCCTCTGGTACCTCTTCAACATCTACTTCAACATCTACAACAAACAGGTCTTGAAGGCGTACCATTTCCCCGTAACCGTCACTTTAGTTCAGTTTACTGTTGGTACTGTCCTTGTGGCCTTCATGTGGGGTTTGAATCTCTACAAGAGGCCGAAAATCAATGGCGCCGTGCTTGCAGCTATATTGCCACTGGCTGCGGTGCACACTTTGGGGAACCTTTTCACCAATATGAGTCTTGGAAAGGTGGCTGTGTCTTTCACTCACACCATTAAAGCCATGGAGCCTTTCTTTTCAGTGGTCCTTTCTGCGATGTTCCTTGGAGAGTTTCCTACACCGTGGGTGGTTGGTTCCCTTGTGCCCATTGTCGGTGGAGTTGCACTGGCATCTGTTACTGAAGCCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATGTGTTGAATCAGTCACGTAATGTTCTNAGCAAAAAGGCCATGGTTAAGAAAGATGATTCTATGGACAACATAACTCTCTTCTCTATAATAACAGTAATGTCCTTCTTCTTGTTAGCACCTGCGGCTATCTTCATGGAGGGTGTCAAATTTACCCCGGCTTCCCTGCAATCTGCTGGGTTAAATGTTAGACAAGTGTACACCAGATCTCTTCTTGCTGCACTTTGTTTCCATGCATATCAGCAAGTTTCTTATATGATATTGCAGAGGGTATCACCTGTTACCCATTCAGTTGGAAATTGTGTGAAGCGGGTTGTGGTCATTGTGAGCTCTATCATCTTCTTCCAAACACCTGTCTCTCCTGTGAACGCTTTTGGGACTGCTGTAGCTCTTGCTGGCGTTTTCTTCTATTCAAGGGTGAAGCGAATTAAGCCAAAGACNAAGACAGCTTAATTTTCAATGGTAAAATTTTGCTAGTTGCATCACAAATGCCATATAGCTGCAATTCTGAATTTCTTTGTAGGTGAGATAGGGAATATGAGGATTACCTTTCTTTACCCCATGCCACGNATTTCCTTTTTTCTCTGTNTTTTTTTTTAAGTTGCCTTGTGGATTTTATTATTTATGTCTGAGTAAGTACCTATTGGTTCTGCTCTATTAAAATTTTATCCTCTCTTGAATTTTGCTCAAATACCANATCAAGGTGTGTTTTTAATGTATCATTCTCTACAAGCATATATGTAATCAGCTGTTTTGGTAAATACCATGCAAGTTCTTCTGCTTGNTGACTGGGTTCTCGATAGCCTGTCGCAGTAACTTCACTTGCCCAATATTTTCACAAATTGACCTGTATATATATATTGCAAATGTGGCTTGTTGAACTTTGTTTAATTGATAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00149	146363	150243	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006810 transport

cellular_component

GO:0016020 membrane

GO:0016021 integral component of membrane

molecular_function
GO:0005215 transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000149s00009564.1	PF00892.15	EamA	123	240	1.00E-11
Glyur000149s00009564.1	PF03151.11	TPT	250	396	1.80E-42

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	86.416
SRR1783600	control	86.984
SRR1783602	moderate drought stress	50.051
SRR1811619	moderate drought stress	50.790

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	59.045
DRR006520	Root Summer glycyrrhizin high producing strain	58.574
DRR006521	Root Winter glycyrrhizin high producing strain	33.897
DRR006522	Root Winter glycyrrhizin high producing strain	32.503
DRR006523	Root Summer glycyrrhizin low producing strain	41.885
DRR006524	Root Summer glycyrrhizin low producing strain	41.125
DRR006525	Leaf Summer glycyrrhizin high producing strain	38.502
DRR006526	Leaf Summer glycyrrhizin high producing strain	38.797

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	125.578
SRR2868004	Drought Stress (root)	57.759
SRR2967015	Control (root)	67.801

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	42.262
SRR9715740	Leaf	38.089
SRR9715741	Leaf	42.953
SRR9715739	Root	47.415
SRR9715742	Root	56.087
SRR9715743	Root	50.254

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	58.265
SRR8749028	MeJA induced 9h	55.534
SRR8749029	MeJA induced 9h	28.001
SRR8749030	Uninduced	24.987
SRR8749031	Uninduced	7.923
SRR8749032	Uninduced	7.804

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	91.354
SRR8400027	Control - Root	95.721