Gene detail information of Glyur000149s00009558 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G02800.1 | 2.00E-70 | |
| NR | XP_003554250.1 | 6.78E-148 | PREDICTED: arginine and glutamate-rich protein 1-like [Glycine max] |
| trEMBL | tr|I1N9H4|I1N9H4_SOYBN | 3.00E-148 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G33850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00149 | 112279 | 114889 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.183 |
| SRR1783600 | control | 10.103 |
| SRR1783602 | moderate drought stress | 5.532 |
| SRR1811619 | moderate drought stress | 5.630 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.010 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.914 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.089 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.085 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.087 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.074 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.474 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.552 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.604 |
| SRR2868004 | Drought Stress (root) | 5.820 |
| SRR2967015 | Control (root) | 7.303 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.555 |
| SRR9715740 | Leaf | 0.277 |
| SRR9715741 | Leaf | 0.546 |
| SRR9715739 | Root | 0.982 |
| SRR9715742 | Root | 1.547 |
| SRR9715743 | Root | 1.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 46.729 |
| SRR8749028 | MeJA induced 9h | 25.030 |
| SRR8749029 | MeJA induced 9h | 30.765 |
| SRR8749030 | Uninduced | 1.536 |
| SRR8749031 | Uninduced | 1.678 |
| SRR8749032 | Uninduced | 2.409 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.425 |
| SRR8400027 | Control - Root | 8.807 |