Gene detail information of Glyur000149s00009554 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G62650.2 | 3.00E-15 | |
| NR | XP_003535999.1 | 1.01E-61 | PREDICTED: uncharacterized protein LOC100806979 [Glycine max] |
| trEMBL | tr|I1L7S5|I1L7S5_SOYBN | 4.00E-62 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G01950.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00149 | 71003 | 71491 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.579 |
| SRR1783600 | control | 2.613 |
| SRR1783602 | moderate drought stress | 1.746 |
| SRR1811619 | moderate drought stress | 1.924 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.062 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.902 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.187 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.647 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.728 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.949 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 42.552 |
| SRR2868004 | Drought Stress (root) | 29.790 |
| SRR2967015 | Control (root) | 28.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.844 |
| SRR9715740 | Leaf | 21.825 |
| SRR9715741 | Leaf | 24.626 |
| SRR9715739 | Root | 16.510 |
| SRR9715742 | Root | 7.074 |
| SRR9715743 | Root | 9.360 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.127 |
| SRR8749028 | MeJA induced 9h | 1.125 |
| SRR8749029 | MeJA induced 9h | 5.210 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.156 |
| SRR8749032 | Uninduced | 1.030 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.768 |
| SRR8400027 | Control - Root | 13.150 |