Gene detail information of Glyur000149s00009549 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G47480.1 | 3.00E-14 | Protein of unknown function (DUF3511) |
| NR | XP_003591456.1 | 6.06E-39 | hypothetical protein MTR_1g087730 [Medicago truncatula] |
| trEMBL | tr|G7IEH6|G7IEH6_MEDTR | 2.00E-39 | DUF3511 domain protein {ECO:0000313|EMBL:AES61707.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00149 | 41168 | 43244 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000149s00009549.1 | PF12023.3 | DUF3511 | 132 | 171 | 5.40E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.029 |
| SRR1783600 | control | 7.360 |
| SRR1783602 | moderate drought stress | 14.672 |
| SRR1811619 | moderate drought stress | 15.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.226 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.046 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.586 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.955 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.218 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.065 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.760 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.978 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.659 |
| SRR2868004 | Drought Stress (root) | 4.976 |
| SRR2967015 | Control (root) | 5.262 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.159 |
| SRR9715740 | Leaf | 0.370 |
| SRR9715741 | Leaf | 0.304 |
| SRR9715739 | Root | 0.324 |
| SRR9715742 | Root | 1.483 |
| SRR9715743 | Root | 0.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.402 |
| SRR8749028 | MeJA induced 9h | 1.357 |
| SRR8749029 | MeJA induced 9h | 1.596 |
| SRR8749030 | Uninduced | 1.746 |
| SRR8749031 | Uninduced | 0.762 |
| SRR8749032 | Uninduced | 2.705 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.629 |
| SRR8400027 | Control - Root | 3.120 |