Gene detail information of Glyur000149s00009546 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G38700.1 | 3.00E-25 | |
| NR | XP_003519752.1 | 2.90E-84 | PREDICTED: uncharacterized protein LOC100799674 [Glycine max] |
| trEMBL | tr|I1JBI1|I1JBI1_SOYBN | 1.00E-84 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G01780.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00149 | 30843 | 31418 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000149s00009546.1 | PF05553.6 | DUF761 | 152 | 188 | 1.10E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.466 |
| SRR1783600 | control | 3.486 |
| SRR1783602 | moderate drought stress | 1.551 |
| SRR1811619 | moderate drought stress | 1.285 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 69.570 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 72.953 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.390 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.378 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 198.445 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 199.607 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.077 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.616 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.994 |
| SRR2868004 | Drought Stress (root) | 16.536 |
| SRR2967015 | Control (root) | 34.596 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.129 |
| SRR9715740 | Leaf | 10.779 |
| SRR9715741 | Leaf | 10.342 |
| SRR9715739 | Root | 129.003 |
| SRR9715742 | Root | 120.326 |
| SRR9715743 | Root | 120.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 444.508 |
| SRR8749028 | MeJA induced 9h | 636.165 |
| SRR8749029 | MeJA induced 9h | 497.287 |
| SRR8749030 | Uninduced | 606.649 |
| SRR8749031 | Uninduced | 381.350 |
| SRR8749032 | Uninduced | 349.584 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.279 |
| SRR8400027 | Control - Root | 11.591 |