Gene detail information of Glyur000148s00009052 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G15800.1 | 3.00E-35 | ralf-like 33 |
| NR | XP_004494597.1 | 8.65E-62 | PREDICTED: protein RALF-like 33-like [Cicer arietinum] |
| Swissprot | tr|Q8L9P8|RLF33_ARATH | 2.00E-43 | Protein RALF-like 33 (Precursor) |
| trEMBL | tr|A2Q327|A2Q327_MEDTR | 1.00E-60 | Uncharacterized protein {ECO:0000313|EMBL:AFK41182.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00148 | 141445 | 142109 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000148s00009052.1 | PF05498.6 | RALF | 145 | 207 | 8.90E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.431 |
| SRR1783600 | control | 16.428 |
| SRR1783602 | moderate drought stress | 10.701 |
| SRR1811619 | moderate drought stress | 10.647 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.293 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.319 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.068 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.042 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.914 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.387 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.445 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 151.455 |
| SRR2868004 | Drought Stress (root) | 186.662 |
| SRR2967015 | Control (root) | 118.743 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.034 |
| SRR9715740 | Leaf | 3.890 |
| SRR9715741 | Leaf | 6.802 |
| SRR9715739 | Root | 52.552 |
| SRR9715742 | Root | 22.647 |
| SRR9715743 | Root | 28.596 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 22.012 |
| SRR8749028 | MeJA induced 9h | 23.738 |
| SRR8749029 | MeJA induced 9h | 24.890 |
| SRR8749030 | Uninduced | 144.785 |
| SRR8749031 | Uninduced | 60.854 |
| SRR8749032 | Uninduced | 52.995 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 71.519 |
| SRR8400027 | Control - Root | 76.817 |