Gene detail information of Glyur000148s00009041


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G05590.15.00E-92ribosomal protein L18
NRKHN20393.11.08E-12860S ribosomal protein L18-2 [Glycine soja]
COGYP_183915.11.00E-0750S ribosomal protein L18e [Thermococcus kodakarensis KOD1]
Swissprottr|P42791|RL182_ARATH3.00E-11660S ribosomal protein L18-2
trEMBLtr|I1JQM9|I1JQM9_SOYBN7.00E-128Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G37340.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold001487825882793-


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000148s00009041.1PF00828.14Ribosomal_L18e371574.00E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control107.315
SRR1783600control107.155
SRR1783602moderate drought stress74.919
SRR1811619moderate drought stress74.511

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain265.100
DRR006520Root Summer glycyrrhizin high producing strain261.153
DRR006521Root Winter glycyrrhizin high producing strain113.874
DRR006522Root Winter glycyrrhizin high producing strain109.666
DRR006523Root Summer glycyrrhizin low producing strain219.898
DRR006524Root Summer glycyrrhizin low producing strain219.829
DRR006525Leaf Summer glycyrrhizin high producing strain74.328
DRR006526Leaf Summer glycyrrhizin high producing strain73.638

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)461.335
SRR2868004Drought Stress (root)250.809
SRR2967015Control (root)241.551

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf139.379
SRR9715740Leaf153.361
SRR9715741Leaf129.471
SRR9715739Root126.014
SRR9715742Root147.444
SRR9715743Root140.332

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h773.793
SRR8749028MeJA induced 9h355.502
SRR8749029MeJA induced 9h443.462
SRR8749030Uninduced54.299
SRR8749031Uninduced40.946
SRR8749032Uninduced70.778

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root396.517
SRR8400027Control - Root312.237

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved