Gene detail information of Glyur000148s00009028 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | NP_001236503.1 | 2.86E-09 | uncharacterized protein LOC100305519 [Glycine max] |
| trEMBL | tr|C6SVF8|C6SVF8_SOYBN | 1.00E-09 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G41880.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00148 | 14061 | 14692 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.740 |
| SRR1783600 | control | 19.009 |
| SRR1783602 | moderate drought stress | 13.040 |
| SRR1811619 | moderate drought stress | 12.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.608 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.836 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.172 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.026 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.362 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.217 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 42.258 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 43.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.680 |
| SRR2868004 | Drought Stress (root) | 11.574 |
| SRR2967015 | Control (root) | 11.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 31.871 |
| SRR9715740 | Leaf | 40.289 |
| SRR9715741 | Leaf | 29.992 |
| SRR9715739 | Root | 2.322 |
| SRR9715742 | Root | 4.591 |
| SRR9715743 | Root | 4.264 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.503 |
| SRR8749028 | MeJA induced 9h | 13.286 |
| SRR8749029 | MeJA induced 9h | 9.885 |
| SRR8749030 | Uninduced | 13.120 |
| SRR8749031 | Uninduced | 13.243 |
| SRR8749032 | Uninduced | 12.624 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.064 |
| SRR8400027 | Control - Root | 13.068 |