Gene detail information of Glyur000148s00009027 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G56260.1 | 7.00E-23 | |
| NR | NP_001236503.1 | 2.59E-50 | uncharacterized protein LOC100305519 [Glycine max] |
| trEMBL | tr|C6SVF8|C6SVF8_SOYBN | 1.00E-50 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G41880.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00148 | 11059 | 13074 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000148s00009027.1 | PF15490.1 | Ten1_2 | 34 | 120 | 6.90E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.987 |
| SRR1783600 | control | 2.052 |
| SRR1783602 | moderate drought stress | 1.368 |
| SRR1811619 | moderate drought stress | 1.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.970 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.444 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.512 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.185 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.980 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.472 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.570 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.267 |
| SRR2868004 | Drought Stress (root) | 8.347 |
| SRR2967015 | Control (root) | 7.632 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.648 |
| SRR9715740 | Leaf | 25.254 |
| SRR9715741 | Leaf | 14.724 |
| SRR9715739 | Root | 2.351 |
| SRR9715742 | Root | 2.305 |
| SRR9715743 | Root | 1.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.184 |
| SRR8749028 | MeJA induced 9h | 6.722 |
| SRR8749029 | MeJA induced 9h | 6.502 |
| SRR8749030 | Uninduced | 10.392 |
| SRR8749031 | Uninduced | 15.839 |
| SRR8749032 | Uninduced | 8.232 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.371 |
| SRR8400027 | Control - Root | 6.561 |