Gene detail information of Glyur000147s00013860 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G53420.1 | 3.00E-11 | Leucine-rich repeat transmembrane protein kinase |
| NR | KEH38573.1 | 8.58E-17 | LRR receptor-like kinase [Medicago truncatula] |
| Swissprot | tr|C0LGG7|Y1534_ARATH | 2.00E-12 | Probable LRR receptor-like serine/threonine-protein kinase At1g53420 (Precursor) |
| trEMBL | tr|A0A072VAW1|A0A072VAW1_MEDTR | 3.00E-17 | LRR receptor-like kinase {ECO:0000313|EMBL:KEH38573.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00147 | 189897 | 190704 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.765 |
| SRR1783600 | control | 1.804 |
| SRR1783602 | moderate drought stress | 3.936 |
| SRR1811619 | moderate drought stress | 3.823 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.071 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.402 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.677 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.817 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.089 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.263 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.240 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.552 |
| SRR2868004 | Drought Stress (root) | 1.598 |
| SRR2967015 | Control (root) | 1.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.306 |
| SRR9715740 | Leaf | 0.233 |
| SRR9715741 | Leaf | 0.614 |
| SRR9715739 | Root | 0.137 |
| SRR9715742 | Root | 0.886 |
| SRR9715743 | Root | 0.443 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.363 |
| SRR8749028 | MeJA induced 9h | 5.223 |
| SRR8749029 | MeJA induced 9h | 1.654 |
| SRR8749030 | Uninduced | 13.036 |
| SRR8749031 | Uninduced | 10.334 |
| SRR8749032 | Uninduced | 12.753 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.043 |
| SRR8400027 | Control - Root | 1.907 |