Gene detail information of Glyur000147s00013858.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G37530.2 | 0 | NAD(P)-binding Rossmann-fold superfamily protein |
| NR | XP_004490831.1 | 0 | PREDICTED: uncharacterized protein C1A6.10-like [Cicer arietinum] |
| COG | YP_004644783.1 | 6.00E-40 | hypothetical protein KNP414_06392 [Paenibacillus mucilaginosus KNP414] |
| Swissprot | tr|P51335|MOEB_PORPU | 3.00E-10 | Probable molybdopterin-synthase adenylyltransferase |
| trEMBL | tr|K7M8D6|K7M8D6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G39360.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00147 | 181208 | 188307 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Ubiquitin Family | ThiF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000147s00013858.1 | PF00899.16 | ThiF | 75 | 108 | 2.50E-09 |
| Glyur000147s00013858.1 | PF00899.16 | ThiF | 121 | 217 | 7.60E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.011 |
| SRR1783600 | control | 1.949 |
| SRR1783602 | moderate drought stress | 2.606 |
| SRR1811619 | moderate drought stress | 2.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.123 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.932 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.199 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.133 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.792 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.275 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.622 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.653 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.923 |
| SRR2868004 | Drought Stress (root) | 3.990 |
| SRR2967015 | Control (root) | 4.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.707 |
| SRR9715740 | Leaf | 2.505 |
| SRR9715741 | Leaf | 3.627 |
| SRR9715739 | Root | 1.679 |
| SRR9715742 | Root | 3.984 |
| SRR9715743 | Root | 3.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.506 |
| SRR8749028 | MeJA induced 9h | 6.927 |
| SRR8749029 | MeJA induced 9h | 6.761 |
| SRR8749030 | Uninduced | 3.183 |
| SRR8749031 | Uninduced | 0.923 |
| SRR8749032 | Uninduced | 1.780 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.388 |
| SRR8400027 | Control - Root | 4.627 |