Gene detail information of Glyur000147s00013845 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G37660.1 | 3.00E-61 | plasmodesmata-located protein 7 |
| NR | XP_003616268.1 | 5.55E-159 | Cysteine-rich repeat secretory protein [Medicago truncatula] |
| Swissprot | tr|Q0WPN8|CRR60_ARATH | 3.00E-107 | Cysteine-rich repeat secretory protein 60 (Precursor) |
| trEMBL | tr|G7KG39|G7KG39_MEDTR | 2.00E-159 | Salt stress response/antifungal domain protein {ECO:0000313|EMBL:AES99226.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00147 | 125321 | 127070 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000147s00013845.1 | PF01657.12 | Stress-antifung | 39 | 136 | 1.60E-21 |
| Glyur000147s00013845.1 | PF01657.12 | Stress-antifung | 181 | 233 | 1.40E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.692 |
| SRR1783600 | control | 7.617 |
| SRR1783602 | moderate drought stress | 5.298 |
| SRR1811619 | moderate drought stress | 4.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.537 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.611 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.931 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.908 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.809 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.221 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.773 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.685 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.419 |
| SRR2868004 | Drought Stress (root) | 11.702 |
| SRR2967015 | Control (root) | 12.015 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.558 |
| SRR9715740 | Leaf | 0.657 |
| SRR9715741 | Leaf | 1.608 |
| SRR9715739 | Root | 6.168 |
| SRR9715742 | Root | 7.248 |
| SRR9715743 | Root | 7.780 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.147 |
| SRR8749028 | MeJA induced 9h | 0.035 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.066 |
| SRR8749031 | Uninduced | 0.002 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.572 |
| SRR8400027 | Control - Root | 6.067 |