Gene detail information of Glyur000147s00013841 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G37680.1 | 1.00E-81 | ADP-ribosylation factor-like A1A |
| NR | XP_003544985.1 | 7.44E-104 | PREDICTED: ADP-ribosylation factor-like protein 8B-like [Glycine max] |
| COG | YP_001737337.1 | 4.00E-19 | small GTP-binding protein [Candidatus Korarchaeum cryptofilum OPF8] |
| Swissprot | tr|P51822|ARF1_DAUCA | 3.00E-30 | ADP-ribosylation factor 1 |
| trEMBL | tr|I1MBV8|I1MBV8_SOYBN | 3.00E-104 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G39540.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00147 | 98475 | 100812 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000147s00013841.1 | PF00025.16 | Arf | 9 | 154 | 1.10E-40 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.289 |
| SRR1783600 | control | 5.081 |
| SRR1783602 | moderate drought stress | 4.982 |
| SRR1811619 | moderate drought stress | 5.231 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.825 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.176 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 31.403 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 30.636 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.032 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.044 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.285 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.098 |
| SRR2868004 | Drought Stress (root) | 22.609 |
| SRR2967015 | Control (root) | 21.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.010 |
| SRR9715740 | Leaf | 20.916 |
| SRR9715741 | Leaf | 18.286 |
| SRR9715739 | Root | 13.185 |
| SRR9715742 | Root | 12.294 |
| SRR9715743 | Root | 12.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.846 |
| SRR8749028 | MeJA induced 9h | 8.907 |
| SRR8749029 | MeJA induced 9h | 13.780 |
| SRR8749030 | Uninduced | 14.422 |
| SRR8749031 | Uninduced | 15.053 |
| SRR8749032 | Uninduced | 15.991 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.925 |
| SRR8400027 | Control - Root | 25.130 |