Gene detail information of Glyur000147s00013830 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004488965.1 | 9.46E-13 | PREDICTED: THO complex subunit 4-like [Cicer arietinum] |
| trEMBL | tr|V7D142|V7D142_PHAVU | 8.00E-12 | Uncharacterized protein {ECO:0000313|EMBL:ESW35378.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00147 | 28832 | 29065 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.656 |
| SRR1783600 | control | 1.740 |
| SRR1783602 | moderate drought stress | 3.072 |
| SRR1811619 | moderate drought stress | 2.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.424 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.664 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.163 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.712 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.241 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.656 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.538 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.526 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.056 |
| SRR2868004 | Drought Stress (root) | 8.008 |
| SRR2967015 | Control (root) | 6.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.497 |
| SRR9715740 | Leaf | 7.142 |
| SRR9715741 | Leaf | 6.077 |
| SRR9715739 | Root | 8.902 |
| SRR9715742 | Root | 8.331 |
| SRR9715743 | Root | 13.544 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.929 |
| SRR8749028 | MeJA induced 9h | 4.324 |
| SRR8749029 | MeJA induced 9h | 6.390 |
| SRR8749030 | Uninduced | 1.339 |
| SRR8749031 | Uninduced | 0.918 |
| SRR8749032 | Uninduced | 2.437 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.455 |
| SRR8400027 | Control - Root | 15.071 |