Gene detail information of Glyur000147s00013826 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G66330.2 | 2.00E-43 | senescence-associated family protein |
| NR | KHN39456.1 | 9.24E-104 | hypothetical protein glysoja_016843 [Glycine soja] |
| trEMBL | tr|K7KAK1|K7KAK1_SOYBN | 1.00E-105 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G41250.6} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00147 | 260 | 2187 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.010 |
| SRR1783600 | control | 16.322 |
| SRR1783602 | moderate drought stress | 17.043 |
| SRR1811619 | moderate drought stress | 16.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.347 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.780 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.811 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.406 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.686 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 74.909 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 76.629 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.623 |
| SRR2868004 | Drought Stress (root) | 19.204 |
| SRR2967015 | Control (root) | 13.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 88.547 |
| SRR9715740 | Leaf | 67.567 |
| SRR9715741 | Leaf | 76.848 |
| SRR9715739 | Root | 0.403 |
| SRR9715742 | Root | 7.706 |
| SRR9715743 | Root | 3.890 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.141 |
| SRR8749028 | MeJA induced 9h | 13.798 |
| SRR8749029 | MeJA induced 9h | 15.120 |
| SRR8749030 | Uninduced | 11.528 |
| SRR8749031 | Uninduced | 4.073 |
| SRR8749032 | Uninduced | 7.481 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.456 |
| SRR8400027 | Control - Root | 23.889 |