Gene detail

Gene detail information of Glyur000146s00016293

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G03530.2	1.00E-128	ureide permease 2
NR	XP_004490188.1	0	PREDICTED: ureide permease 2-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q9ZQ89\|UPS2_ARATH	5.00E-172	Ureide permease 2
trEMBL	tr\|V7AQ29\|V7AQ29_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW06698.1}

Sequence

Transcript Sequence

>Glyur000146s00016293.1
ATGAATGATTTCTCTGAGATTTCCTCCTTGATTACTTCAATTTCTGAGAGCATTTTATGTACCGAGTTGAAAATGTATATGGTGGAGAGCAAGGGAGGTGCCATAGTGTGCATGCTCTTGGCTCTTTTCTTCTTGGGGACATGGCCTGCTGTTTTGACCCTGTTAGAAAGGCGAGGCCGTCTTCCACAGCATACCTACCTCGATTACTCAATCACCAATCTATTGGCCGCTCTCATCATCGCTCTTACATTTGGTGAGATAGGAAAGAGCACGCCTGATGAGCCCAATTTCTTAGTTCAACTTGCTCAGGTGGTGTGGTCCTTAGCCTTGGGAATCTGTCCACACAATATGCATGGGCTTTTGTTGGGCTGTCAGTTACTGAACCCTATACTAAAGAAAATATTCCCTTCAGCTTGCTCCAGTACTGAATCCTACTGCATTATCTTTGTTCTGATTGTAACAGGCACAACCTTAAATTACTTTCTGGATGACAAAATCAATAAAGCGGAGATTCTTTTCCCAGGAGTTGGTTGCTTTTTGGTTGCGGTTTGTCTAGGCTCCGCTGTTCATTCATCTAATACTGCTGATAATGAAGCCAAGCTCAACTATTTGTCAAGTGATTATAAAGATGGAGCCGTGTATGATCTTGAAAGTGGAAGCAATTCAGAAGACAAAATTAAAGCAGGAACTGCAAGCTTGAGAAAAGAAGAGCTATTAAGGCAGGTTTTTGGGAAGAGCACTTTCATTGGATTGACCATAACTTTCTTTGCTGGAGTTTGTTTTTCTATGTTCTCACCAGCATTCAACTTAGCGACAAATGACCAGTGGCACACTCTTAAAAAAGGGGTTCCCCATTTGAGTGTTTACACTGCCTTCTTTTACTTTTCTGTCTCTTGTTTTGTAGTTGCCATCATTCTAAACATCACCTTCCTTTACCACCCTGTCTTGAACTTACCAAAGTCATCATTGAAGGATTATTTGGGGGACTGGGATGGAAGAAGTTGGGCCCTTTTTGCTGGTCTCCTCTGTGGGTTTGGGAATGGTCTCCAATTTATGGGAGGTCAAGCTGCAGGATATGCAGCAGCAGATGCTGTTCAGGCACTTCCACTTGTGAGCACTTTTTGGGGCATCGTTTTGTTTGGGGAGTATCGGAAATCATCACCAAGAACGTATATACTGTTGGGGAGTATGTTGTTTATGTTTATTGTGGCTGTTGCTGTGCTCATGGCATCCTCAGGNCATAGGAAACAGTGATTAAGCTGTTATGGAACAATTATTAAGCATATGTCAAGGATTAGCTAGTTTGAGTCCACACACACACACATGCTAATAAGAGATTCCTCAGAGCCCACGGGTAAGAAAAGAATGTGGAAGAAACAAAGCATGAATAGAATTGAAATATTATTGTAGAATTATTGTTTTTTATCTTTATTGTTATTAAATTGTGTATAATTGAACTTTCAAACTGAAAATTTGTGCTACGAAATATTTGTACAAGGATTGTTCTAACTTTAGAGAGACACGAGTGGATATTTAGTAACAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00146	98577	104362	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0071705 nitrogen compound transport

cellular_component
GO:0016021 integral component of membrane

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000146s00016293.1	PF07168.6	Ureide_permease	38	366	2.20E-146

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.204
SRR1783600	control	6.246
SRR1783602	moderate drought stress	6.028
SRR1811619	moderate drought stress	6.020

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	10.227
DRR006520	Root Summer glycyrrhizin high producing strain	10.091
DRR006521	Root Winter glycyrrhizin high producing strain	2.888
DRR006522	Root Winter glycyrrhizin high producing strain	2.716
DRR006523	Root Summer glycyrrhizin low producing strain	8.417
DRR006524	Root Summer glycyrrhizin low producing strain	8.411
DRR006525	Leaf Summer glycyrrhizin high producing strain	12.671
DRR006526	Leaf Summer glycyrrhizin high producing strain	12.748

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	32.826
SRR2868004	Drought Stress (root)	34.790
SRR2967015	Control (root)	34.744

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	13.475
SRR9715740	Leaf	16.671
SRR9715741	Leaf	14.754
SRR9715739	Root	3.434
SRR9715742	Root	4.417
SRR9715743	Root	4.641

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.287
SRR8749028	MeJA induced 9h	1.527
SRR8749029	MeJA induced 9h	2.993
SRR8749030	Uninduced	0.858
SRR8749031	Uninduced	0.186
SRR8749032	Uninduced	0.144

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	17.580
SRR8400027	Control - Root	18.510