Gene detail

Gene detail information of Glyur000146s00016291

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G03530.2	3.00E-151	ureide permease 2
NR	XP_004490191.1	0	PREDICTED: ureide permease 1-like [Cicer arietinum]
COG	YP_006871970.1	7.00E-12	putative integral membrane protein, putative sugar permease [Emticicia oligotrophica DSM 17448]
Swissprot	tr\|Q9ZQ89\|UPS2_ARATH	0	Ureide permease 2
trEMBL	tr\|G7JY00\|G7JY00_MEDTR	0	Ureide permease-like protein {ECO:0000313\|EMBL:AES97054.1}

Sequence

Transcript Sequence

>Glyur000146s00016291.1
CTTGGGAGTTGCGACCAATACTCCAATAGATTGACTCTGTATTCAACTTACTCGGTCATACTTTTCATCCTCCTCACGCATATACTAATTTTAATGGCATATAATATATATGATGTTGCTATTAGGATTCTTTGGGATGGTATATTCTTCATTATCATACATAGACTAGCTAGGAAAGTGTGTGTGGTGTAGAGAAGAGTAGTGAAGTTGGGAAAATCAATGTATGTGGTGGAGAGCAAGGGAGGCGCCATAGTGTGCATGCTGTTTTCTCTGTTCTTTTTGGGGACATGGCCTGCTGTGATGACTCTTTTGGAAAGGAGAGGTCGTCTTCCTCAGCATACCTACCTTGACTACACCCTCACCAATCTCTTTGCTGCTGTTATCATTGCTTTCACCTTTGGTCAGATTGGCTCTGATCACCCCAACTTCCTATCTCAGCTTTCTCAGGATAACTTGCCTTCTGTTCTGTTTGCCATGGCGGGTGGGGTGGNTCTCAGCATTGGAAATCTGTCCACTCAGTATGCTTGGGCTTTTGTTGGAACAACCTTGAATTACTTTTTGGATGACAAAATCAATAAAGCTGAGATCCTCTTCCCAGGAGTTGGTTGCTTTCTCATAGCAGTTTGTTTAGGCTCTGCTGTTCATTCATCTAATAGTGCTGATAATAAGGCTAAGCTCAAGGATTTCTCAAGTGATCACAAAGATGCAGCTCGGGGCACTAGTTTATCCACTTTGAAAGAAGCAAGTGAAGTTGATTCAAAGGATCTAGAGAATGGAAGTGGTCCTGCNTACAAAGCCAAAGCAGGAACTGCAGTTTTTCTTATAGAGCTTGAGAAAAGAAGATCCATTAAGGCAGCTATAACTTTCTTTGCTGGAGTTTGCTTCTCCCTATTCTCACCAGCATTCAACTTGGCAACAAATGACCAGTGGCACACTCTAAAGAAAGGGGTTCCACATTTGAGTGTTTACACTGCCTTCTTTTACTTTTCTGTCTCTTGTTTTGTTGTTGCCATCATTCTAAACATCACCTTCCTTTACCACCCTGTCTTGAACTTACCAAAGTCATCACTGAAGGCTTATTTGGGGGACTGGGATGGAAGAGGTTGGGCCCTTTTGGCTGGTCTCCTCTGTGGGTTTGGGAATGGTCTCCAATTTATGGGAGGTCAAGCTGCAGGATATGCAGCAGCAGATGCNGTTCAGGCACTTCCACTTGTGAGCACCTTTTGGGGAGTCGTTTTGTTCGGGGAATATCGCAAATCATCAAGGAGAACGTATGTATTGCTTGGGAGCATGTTGCTTATGTTCATTGCCGCAGTTGCTATACTTATGGCATCATCTGGGCATCGAAAATGATCATGCAGCTGAAGGGGAAATGTTCACAAAGATTGAAAGTGTAAATAACTGGATAGGATAAACTAGCTATAAAACCTTTATAGTAGTTTTAGTCCCTGTTATCATGATTGTGCAATTTGAGTCCCTGGTTTTTAATTGGCCAAATTGGGCCTCAAGTTATCACAATTGTTACAATTAGGTCCCTCTATCGCTACTTCATCCAATTTTTAACATCTAGAGCCTATGTGGCACATGTGAGACGGAATTGACACTAAATTAGGTTATCTTGACACTGTGTCGGGCTATCTTGGCACTAATGGCATGACAAAAATACGCACACGTAAGAAATTTTAAACATGTATTGCATCACGTGTGTTACCGACTTGTTTTAAAAAAATTCTGGCAACCTACATCATGCCAAGGTAANCTCAATTAGTGTCAAATTCATCTCATGTGTGCCACGTAGGCTCTTAGTGTTAAAATTTGGATGAAATAACGATGGAAGACCTAATTGCAATAATTGCGATAATTGTGGAACCCAATTCGCTCAATTAGAAACTGAGGGTCCAAACCTCACAATTACAATTACCGGGGGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00146	84100	88489	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0071705 nitrogen compound transport

cellular_component
GO:0016021 integral component of membrane

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000146s00016291.1	PF07168.6	Ureide_permease	14	327	6.90E-159

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.023
SRR1783600	control	1.831
SRR1783602	moderate drought stress	2.677
SRR1811619	moderate drought stress	2.570

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.623
DRR006520	Root Summer glycyrrhizin high producing strain	1.562
DRR006521	Root Winter glycyrrhizin high producing strain	0.941
DRR006522	Root Winter glycyrrhizin high producing strain	0.980
DRR006523	Root Summer glycyrrhizin low producing strain	3.026
DRR006524	Root Summer glycyrrhizin low producing strain	3.033
DRR006525	Leaf Summer glycyrrhizin high producing strain	33.908
DRR006526	Leaf Summer glycyrrhizin high producing strain	34.193

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.494
SRR2868004	Drought Stress (root)	9.435
SRR2967015	Control (root)	12.798

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	18.321
SRR9715740	Leaf	17.155
SRR9715741	Leaf	31.410
SRR9715739	Root	3.858
SRR9715742	Root	2.778
SRR9715743	Root	2.855

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.082
SRR8749028	MeJA induced 9h	3.311
SRR8749029	MeJA induced 9h	1.162
SRR8749030	Uninduced	7.660
SRR8749031	Uninduced	1.279
SRR8749032	Uninduced	0.629

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.841
SRR8400027	Control - Root	18.500