Gene detail

Gene detail information of Glyur000146s00016282

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G13750.1	0	Purple acid phosphatases superfamily protein
NR	AES97120.2	0	inactive purple acid phosphatase-like protein [Medicago truncatula]
COG	YP_003093614.1	1.00E-17	metallophosphoesterase [Pedobacter heparinus DSM 2366]
Swissprot	tr\|Q9LMX4\|PPA1_ARATH	0	Probable inactive purple acid phosphatase 1 (Precursor)
trEMBL	tr\|G7JZ41\|G7JZ41_MEDTR	0	Purple acid phosphatase {ECO:0000256\|RuleBase:RU361203}

Sequence

Transcript Sequence

>Glyur000146s00016282.1
ATGGTTGCATATGTGTCGGGGGTTAAGAATATCATGCTGAAGCAGCAAAACAGAAATGGGGGAATCCAAGTTTGTCTTCTTGGCATTATTTCTACTGGTTTGTTCAGTGCTCCAAAGGGTAGTAAAGTCACATGGAGATCAGCCTCTGTCAAAAGGGGAACTGCAGAATGGGTAACCGTGGAATACAGCTCTCCAATTCCATCAATTGATGATTGGATTGGCGTGTTCTCTCCCGCCAACTTTAGTGCTTCTGCNTGTCCAAAAGAAAATCGTAGGGTTTATCCACCGCTATTGTGTTCTGCACCCATTAAGTATCAATATGCAACTTACTCAAATCCTCAGTACAATGTAACTGGAAAAGGGTTTCTGAAGCTTCAGCTGATTAATCAGAGATNAGATTTCTCATTTGCACTGTTTTCTGGTGGCTTGTCAAATCCAAAGCTAGCGGCAGTGTCCAATAAAATAGCTTTTGCAAATCCAAATGCACCAGTTTACCCTCGCCTGGCACTAGGAAAGTCATGGAATGAGATGACTGTAACATGGACAAGTGGATATGGGATCAGTGATGCTGAACCTTTTGTTCAATGGGGTCCAAAAGGAGGAGATCATGTACATTCACCTGCTGGGACACTGACTTTCACTCGTGATAGCTTATGTGGTGCACCAGCAAGAACAGTGGGGTGGCGTGACCCTGGATACATACACACCAGTTATCTGAAAGAACTGTGGCCCAACAGAATATATGAGTACAAGATAGGACACAAACTAAACAATGGTACANATATTTGGAGTGGAAACTATCAGTTTAGAGCAGCTCCTTTTCCCGGGCAGANGTCTATACAACGTGTAGTCGTATTTGGTGATATGGGGAAGGAGGAAGTTGATGGTTCCAATGAATACAACAATTTCCAGCATGGCTCAATTAACACTACTCAGCAGCTTATCCAAGACTTAGAAAACATTGACATGGTTTTCCATATAGGAGATATAAGTTATGCAAATGGATACCTTTCTCAGTGGGATCAATTTACAGCACAGGTGGAGCCAATTGCATCAGCTGTGCCTTACATGATTGCAAGTGGGAACCATGAGCGAGATTGGCCTGGGACAGGATCCTTTTATGGGAACATGGATTCTGGAGGAGAATGTGGTGTGTTGGCAGAGACTATGTTCTACGTCCCTACTTCAAACAGGGCTAAGTATTCAATTGATTATGGCTTGTTCCGCTTCTGTGTTGCTGACACTGAACATGATTGGAGAGAAGGAGCAGAACAATACAAGNTCATTGAGCATTGCTTGGCATCAGTTGACAGGCAAAAACAGCCATGGCTAATTTTCCTTGCACACCGTGTACTTGGTTACTCTTCTTGTATCTGTTATGCAGAAGAGGGATCATTTGCTGAACCAATGGGGAGAGAGAGCCTTCAAAAGCTGTGGCAGNAATACAAGGTGGACATTGCCATCTATGGCCACGTGCACAATTATGAGAGGACATGTCCCATTTACCAGAATATCTGCACTAATGAAGAGAAACACCACTATAAGGGAACCTTAAATGGGACCATACATATTGTTGCTGGTGGTGGTGGGGCAAGCCTTTCAACATTTACTTCTCTCAAAACCAAATGGAGNATCTTCAAAGACTATGATTATGGATTTGTAAAACTAACTGCATTTGATCATTCAAATTTGCTGTTTGAGTACAAGAAGAGCAAAGATGGGAAGGTTTATGACTCATTCAAAATATCAAGGGATTATAGAGACATCTTGGCTTGCACCATGGATAGTTGCCCAAGTACAACGATGGCATCTTGATTGATGAAATGGCTACACAGCTTCAATGTATCTAGCCATGTGAAAGCAGTGGATGGATTATCTTCCACAAACAGATAGATGTGTATATCGGTATATATGGCTGCGAGCCCTGTCACCTTGATCAATTTGGCTTTGATGGAATGCACAATCAATTTACTGCTGTTGGAAGTTTTATGCTGGAAGCACTTTCTTGTACCTAAAATAGAATAGGAAGGAGAAATACAATGATACACATGCAACTCCAGTAATTACCAAAACCCAATTGAATCCAGATGTGTAGTCAAAAACTCTGGTTTCAAAGTTCATTCCAAATACTCCTGCCACAGCAGCAAATACTGCAGCTACCAATGTAGCCGCTGTAAGAAGCAACTCAAATTGTATTAGGCGGTTTTGAATGTTTCCCTGTAATAGATAGAGTGAGTTTAGAATATCAAAAAAATAANGGAATGAACAGGCAGAATGTAGCTTATTGTTAATCTTAGCTTACCAATTTTATGTTGATAAAATCTTCAGTGTCGTCAATGTATTCTTTCAGCTGCATTACCAACAAAAGAAAAATATACTTATGTGTCTGCACCATGCACCATGCTTAAATAATAAAATCTTATGCTACTAATTATGCAAAGTCATCATGGCAATTATGCATGCTCTGAGCTAATCTGATGTTATGTAAGTGCCTTAGTTATATTAGCAAATACTATGTTAGCAATCATACAGATACTGCAATTTATAAGTAATATGGGTAAGTTCTAATACTACAGCTCTGAANAAGTCGAACTTCTCATACCGACAATAATGTGTTGAGAGTATTATCAATGACGATAAAGTATGATTCCAGCAACATTTCCAGTGGCTGAATCCTTTCCCCATTATCAGATGAACCCACTGAACTACCATGTTTACTAAAATTCCCAATGCTGCTGAAAGCCCTTTGCAACATCTGGACCCCACTAATTGACCGCTCTGGTGAAGCAGGAGCAGATCTTGAAATCACTGTACCTGATGATGTATGAGTTTGAAAACAATCATTTAAAGGGTAAGGATCTGATCCTCTCCTTTTCTCAGTAAGGCACATCTCAGCCATGTCACCATCATCATCCATGAGATGTTCTATTTCATCACGAACCTGGGAATTAAGTATAAGTTAAGTTACTAGTTGCTTGTCGCAAAAAGCTTGAAAAATAAGAATGCTAATCAAGGATGAGAATTCTACGTTGATCGACCTTCTGAACTCGCTGAGTCAACGCAAGGAGGTGACCTTTAAATCTTCGAACACGTTCCAGATTGAGAGTACTGATAGATGAGGCCAGTTCATCTAGCACGGGATGTATTTCCATTTCTAGTTCAC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00146	28713	37218	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0003993 acid phosphatase activity

GO:0016787 hydrolase activity

GO:0046872 metal ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000146s00016282.1	PF00149.23	Metallophos	282	495	3.60E-17
Glyur000146s00016282.1	PF14008.1	Metallophos_C	520	580	2.00E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.930
SRR1783600	control	2.898
SRR1783602	moderate drought stress	4.041
SRR1811619	moderate drought stress	4.010

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.111
DRR006520	Root Summer glycyrrhizin high producing strain	4.247
DRR006521	Root Winter glycyrrhizin high producing strain	5.738
DRR006522	Root Winter glycyrrhizin high producing strain	5.305
DRR006523	Root Summer glycyrrhizin low producing strain	4.804
DRR006524	Root Summer glycyrrhizin low producing strain	4.794
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.779
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.706

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.393
SRR2868004	Drought Stress (root)	8.293
SRR2967015	Control (root)	8.440

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.385
SRR9715740	Leaf	2.839
SRR9715741	Leaf	4.680
SRR9715739	Root	0.490
SRR9715742	Root	2.159
SRR9715743	Root	1.812

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.512
SRR8749028	MeJA induced 9h	1.879
SRR8749029	MeJA induced 9h	1.407
SRR8749030	Uninduced	1.880
SRR8749031	Uninduced	0.903
SRR8749032	Uninduced	0.984

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	6.276
SRR8400027	Control - Root	5.910