Gene detail

Gene detail information of Glyur000146s00016281

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G03620.2	3.00E-116	magnesium transporter 3
NR	XP_004490198.1	0	PREDICTED: magnesium transporter MRS2-5-like [Cicer arietinum]
Swissprot	tr\|Q9ZPR4\|MRS25_ARATH	2.00E-172	Magnesium transporter MRS2-5
trEMBL	tr\|I1JEF4\|I1JEF4_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA02G13080.1}

Sequence

Transcript Sequence

>Glyur000146s00016281.1
CAGAATCTTAATTTTATTTTAAATCTGATATTATTTCTTAAATTCTGAGTTGTCTTATTTNGATCGAACAGTCCAGATCTCCAACTGCGTGAACGTGGGAGTGTACGGAATCAATTTGCCAGGTTTCGTATATACACTCCTTTTTCAATGAAGTTTTAACTAACGATATCTTACAGTAAAACAGTTAGAAAAGGAAACACAGAACAGGTTCATGGNGATTCACCGAATAATAGTATCAATAATAATCGATAGTCTTAAACTCTCCGAGAAGGGAAATCCTTTCCGTGCAGTATTGTCTTAACCACCTTCCACCTATCGANCATGTTCCACACTCACATATGCGGCATGCCAATCTATTCATCCAACCCTCAGGTTATAATTTGAGAAAATGCAGACAGTATTGATCACCTCAGGTGCTAGTCATGGTTCCTGATTCCAACTATATCATGGTTGTGGTGTAAATGAATAGTAAATAGTAAACGCNGATGGGGAGTCGGCTACCTCATCTGAAAAAAAATACTGTATCGGCACTGCAAGTGAGAAAAGTATAATGCAATGGATGAAACACAAGGCCAGTATTATTGTTCCAGTCTACCTGAGTCTGCCTTATCTCCTGACAGTGGTGGGAGGTCTTATTATAACGGGCAAACGAACCGTGGGGCTGCTGGTATATCAGGCCTGAAGAAGAGAGGTCATGGAACTCGCTCTTGGATNAAAATTGATCAGGATGGACATTCTCAGACCGTGACACTTGACAAGGCTACTATTATGAGACGTTGTTCTTTGCCTTCTAGAGATCTCCGACTATTGGATCCGATGTTCATTTATCCTTCTACGATATTAGGACGGGAGAAGGCTATTGTAGTCAACCTTGAGCAAATCCGGTGTATAATCACCGCTGAGGAGGTCATCCTGATGAATTCATTGGATGGTAGTGTTGGTCAGTACAGGTCGGAATTATGCAACCGGCTTCAGAAAGAAANAGCAGATGATCTACCCTTTGAATTAAGGGCACTGGAGTTGGCTCTGGAATTGACATGCACATCTTTAGATGCTCAGGTAAGTGAACTAGAAATGGAAATACATCCCGTGCTAGATGAACTGGCCTCATCTATCAGTACTCTCAATCTGGAACGTGTTCGAAGATTTAAAGGTCACCTCCTTGCGTTGACTCAGCGAGTTCAGAAGGTTCGTGATGAAATAGAACATCTCATGGATGATGATGGTGACATGGCTGAGATGTGCCTTACTGAGAAAAGGAGAGGATCAGATCCTTACCCTTTAAATGATTGTTTTCAAACTCATACATCATCAGGTACAGTGATTTCAAGATCTGCTCCTGCTTCACCAGAGCGGTCAATTAGTGGGGTCCAGATGTTGCAAAGGGCTTTCAGCAGCATTGGGAATTTTAGTAAACATGGTAGTTCAGTGGGTTCATCTGATAATGGGGAAAGGATTCAGCCACTGGAAATGTTGCTGGAATCATACTTTATCGTCATTGATAATACTCTCAACACATTATTGTCGCTGAAAGAATACATTGACGACACTGAAGATTTTATCAACATAAAATTGGGAAACATTCAAAACCGCCTAATACAATTTGAGTTGCTTCTTACAGCGGCTACATTGGTAGCTGCAGTATTTGCTGCTGTGGCAGGAGTATTTGGAATGAACTTTGAAACCAGAGTTTTTGACTACACATCTGGATTCAATTGGGTTTTGGTAATTACTGGAGTTGCATGTGTATCATTGTATTTCTCCTTCCTATTCTATTTTAGGTACAAGAAAGTGCTTCCAGCATAAAACTTCCAACAGCAGTAAATTGATTGTGCATTCCATCAAAGCCAAATTGATCAAGGTGACAGGGCTCGCAGCCATATATACCGATATACACATCTATCTGTTTGTGGAAGATAATCCATCCACTGCTTTCACATGGCTAGATACATTGAAGCTGTGTAGCCATTTCATCAATCAAGATGCCATCGTTGTACTTGGGCAACTATCCATGGTGCAAGCCAAGATGTCTCTATAATCCCTTGATATTTTGAATGAGTCATAAACCTTCCCATCTTTGCTCTTCTTGTACTCAAACAGCAAATTTGAATGATCAAATGCAGTTAGTTTTACAAATCCATAATCATAGTCTTTGAAGATNCTCCATTTGGTTTTGAGAGAAGTAAATGTTGAAAGGCTTGCCCCACCACCACCAGCAACAATATGTATGGTCCCATTTAAGGTTCCCTTATAGTGGTGTTTCTCTTCATTAGTGCAGATATTCTGTTGCAACATGTAAAAGAAAAAAAAACACAATTACATTTTAGTAGAGAGAATATGCTTATTCTCACCTAGTTGAGGTTTCAATGATGCTATCTGTAGCATGTTAAATGCTAATTGAAGAAAGGTCGTGGTCTTGTGCAGGAAAGCTAACTGTCAATTAGATTTGTTTCATTTTTCTCAAGAACAGCTTAATAGGGAACTGGGCATTTTTTGAACACCTACAGCTTAATTCTGGGTGTTGTGTTTTAATGCATATTATAGCCCGGGTTAAAGATGTTTTTTGTCCTCGTAAATAGGGTAATGTTTGTTTTTGGTCCCCTGATTTTAAAATGTCTCATTTTGGTCTTCCATTTTTTGAATAGGCCATATGTAATCTCTCACTAGGGCTACATGTAGTCCCTTAAAATACGCTCAATAGNGACTATATGTGGTTTATTCTATAAAATGAGACATTTAAAAATTGGNGANTANGGAGACTAAAAATATATTTAACCCTTACAACCCTCTATATTCACCAAAATTTGGAAGGATGGATGAGATGCACAAGGTTGAAGAAACCTGGTAAATGGGACATGTCCTCTCATAATTGTGCACGTGGCCATAGATGGCAATGTCCACCTTGTATTNCTGCCACAGCTTTTGAAGGCTCTCTCTCCCCATTGGTTCAGCAAATGATCCCTCTTCTGCATAACAGATACAAGAAGAGTAACCAAGTACACGGTGTGCAAGGAAAATTAGCCATGGCTGTTTTTGCCTGTCAACTGATGCCAAGCAATGCTCAATGANCTTGTATTGTTCTGCTCCTTCTCTCCAATCATGTTCAGTGTCAGCAACACAGAAGC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00146	25694	31208	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0015693 magnesium ion transport

GO:0030001 metal ion transport

GO:0055085 transmembrane transport

cellular_component
GO:0016020 membrane

molecular_function

GO:0015095 magnesium ion transmembrane transporter activity

GO:0046873 metal ion transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000146s00016281.1	PF01544.13	CorA	315	404	2.40E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.785
SRR1783600	control	4.847
SRR1783602	moderate drought stress	5.007
SRR1811619	moderate drought stress	4.968

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.622
DRR006520	Root Summer glycyrrhizin high producing strain	6.382
DRR006521	Root Winter glycyrrhizin high producing strain	9.940
DRR006522	Root Winter glycyrrhizin high producing strain	9.892
DRR006523	Root Summer glycyrrhizin low producing strain	5.870
DRR006524	Root Summer glycyrrhizin low producing strain	6.112
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.488
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.363

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.924
SRR2868004	Drought Stress (root)	8.601
SRR2967015	Control (root)	8.095

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.200
SRR9715740	Leaf	4.773
SRR9715741	Leaf	6.777
SRR9715739	Root	1.400
SRR9715742	Root	5.511
SRR9715743	Root	4.017

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.894
SRR8749028	MeJA induced 9h	3.717
SRR8749029	MeJA induced 9h	1.476
SRR8749030	Uninduced	2.036
SRR8749031	Uninduced	1.493
SRR8749032	Uninduced	1.145

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	9.275
SRR8400027	Control - Root	8.583