Gene detail

Gene detail information of Glyur000145s00010164.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G42880.1	0	MAP kinase 20
NR	XP_007141393.1	0	hypothetical protein PHAVU_008G191500g [Phaseolus vulgaris]
COG	YP_002560205.1	3.00E-24	hypothetical protein MCCL_0802 [Macrococcus caseolyticus JCSC5402]
Swissprot	tr\|Q5ZCI1\|MPK10_ORYSJ	0	Mitogen-activated protein kinase 10
trEMBL	tr\|V7B650\|V7B650_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW13387.1}

Sequence

Transcript Sequence

>Glyur000145s00010164.1
AACGAAGCAAACTCATTCCCCCAAAACGCTCCAAAATTTTCCACTCTCTCNCCCTTAATAGCTGTACTCTTGTTCTGGGTTTTCGTTTCCCTCTTCAGCTGTAACATTAAGAAACGTGCTTTTTTGGGCGGTGGAATATGAGTGAGTTTCTGTCACGGGGCTGGAGCTTTGTCCCTTCAGGATCGTTTGCGGTAGCTGCCTCTGCAGTTTGGTGCGGTTGGTGTTGGAATTGTAGGAAGGGTGCATGTGGGGTTCCCTTTGGATTCTATGTTTCTTGAAGGATTTGCCAGAGAGAGAGATTGAGAGAGAGAGAGATTAAGCTTAGCTTGGATTGTGGGCTTGTGGTAGGTGAGGGCAAATGTGGCTGAATTTTTGCTGGGAACAAAAATTATTTTTGCTGGGAACAAAAATTGAGACTTGTCTTTTTATGAGTTTGCTGCTTGTGCCTCAAATAGCAAGTTTTTTGAGACTATTCTAGTTGTAGGTGTTGCCAGAGAATGCAGCAAGATCACAGAAAAAAGAATTCAATGGAGATGGATTTTTTCTCCGAATATGGTGAAGCCAACAGGTATAAAATTCAAGAAGTCATCGGGAAAGGAAGCTATGGTGTTGTATGTTCGGCCATTGACACTCATACTGGTGAAAAGGTTGCAATAAAAAAGATCCATGGNATATTTGAGCATATATCTGATGCTGCACGTATTCTCCGTGAGATAAAGTTGCTCAGACTTCTTCGACATCCTGATATTGTTGAAATTAAACACGTTATGCTGCCTCCTTCTAGCAGGGACTTCAAAGATATTTATGTTGTTTTTGAGCTCATGGAGTCTGATCTGCATCAAGTCATCAAAGCCAATGATGACTTAACAAAAGAGCACTATCAGTTTTTCCTTTACCAATTACTTCGAGCATTGAAGTATATGCATACCGCAAATGTCTATCANCGAGACTTGAAGCCAAAGAATATACTGGCCAATGCAAACTCTAAACTTAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCCTTCAGTGACACACCAACAACTGTATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCACCAGAGCTCTGCGGATCATTTTACTCAAAGTATACACCGGCAATTGATATTTGGAGTATAGGCTGCATCTTTGCTGAAGTATTAATAGGAAAACCACTTTTTCCTGGAAAAAATGTTGTCCATCAGTTGGATTTGATTACTGATCTGCTTGGGACCCCCTCAATGGATTCTATATCCCGGGTACGCAATGATAAGGCAAGGAGATACCTAACTAGTATGAGGAAAAAGCAGCCTGTATCATTTGCACAAAAATTTCCTAATGCGGATCCTTTATCACTACCACTACTGGAAAGGTTGCTTGCCTTTGATCCAAAAGACNGGCCTACTGCTGAAGAGGCATTNGCTGATCCTTACTTCAAGGGACTCTCAAAAATTGAGAGGGAACCACCCTGCCAGCCGATTACGAAAATGGAGTTTGAATTTGAAAGGCGAAGGGTAACAAAGGAAGAAATTCGAGAGTTAATTTTCCGTGAGATTCTAGAGTACCATCCTCAACTATTGAAAGACTACATAAATGGAAAAGAGAGAACTAATTTTCTTTCTTCAAGGTTTTTTAGTGCTCTTGATCAATTCAAAAAGCATTTCGCTCATNTTGAGGAAACTGGTGGTAAAAATGATCCAGTCATGCCACATGAAAGAAAACACGCATCACTTCCTAGGTCAACAATTGTACATTCAAATATGACACCCCATAATGAGCAATCAAATATCGCTTCCTGCAAAAACCGCCAAACAACCGAGGAATATAATAATAATTCCAGAGATACAGAAAGCTCTGTGCCAAGGTCCATTCCGGGACTGAAAAAAATTCCACTGGGTATTTAATTGTTATCATATCATTATNATAGTTTGTTAAATTTATGTGCAATATCAGTAATCAATACTCTTAACACTTATCTTTTCAGCAAATAAAACTGGTAAAGTTGTTGGGCCAGTTATTCAATATGAGTATCTGTATGGGAGTGGTATCAAGGATCCATATGATCCCAGGACATTTATCAGAGGAGTGAACAAAGAAAGAACAAGATGATTGAATAGCCAGAGACACAAATTTGCTCAATGTGGTGAAGATTAGTTTGGCTCACTGCTGGTGACACTGCTCATGGAAAGGATGGGGCTGTTCAGTATGGTATACTATATGTCAAGGATCTTCTAGAAGGTTGTCTTGTGAATAGTAGTTTAGCCAGGTGGAGCAATCCTTGTGGAGAGAAAAAAGAAAGGCTCTTTGTAGTGGAGAAGTTGTGGTCTCTAGTGATGCTTATGTGTAGCCAGCTTTCTCTNGTCAAACGTTGTAAACTTTGGTTACAGCTATCAATAAACTATAGTCCTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00145	301124	306998	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.5.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0004707 MAP kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000145s00010164.1	PF00069.20	Pkinase	25	316	1.50E-63

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	13.198
SRR1783600	control	13.444
SRR1783602	moderate drought stress	15.379
SRR1811619	moderate drought stress	15.397

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.495
DRR006520	Root Summer glycyrrhizin high producing strain	11.516
DRR006521	Root Winter glycyrrhizin high producing strain	27.978
DRR006522	Root Winter glycyrrhizin high producing strain	27.059
DRR006523	Root Summer glycyrrhizin low producing strain	7.991
DRR006524	Root Summer glycyrrhizin low producing strain	8.168
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.658
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.795

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	15.451
SRR2868004	Drought Stress (root)	17.625
SRR2967015	Control (root)	20.729

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	11.606
SRR9715740	Leaf	16.641
SRR9715741	Leaf	12.583
SRR9715739	Root	1.080
SRR9715742	Root	3.752
SRR9715743	Root	3.316

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	19.165
SRR8749028	MeJA induced 9h	28.545
SRR8749029	MeJA induced 9h	22.786
SRR8749030	Uninduced	35.792
SRR8749031	Uninduced	29.072
SRR8749032	Uninduced	22.572

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	23.327
SRR8400027	Control - Root	23.178