Gene detail information of Glyur000145s00010163 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42870.1 | 4.00E-11 | phy rapidly regulated 1 |
| NR | XP_003617449.1 | 1.64E-44 | hypothetical protein MTR_5g091690 [Medicago truncatula] |
| Swissprot | tr|Q9SJH0|PAR1_ARATH | 5.00E-20 | Transcription factor PAR1 |
| trEMBL | tr|G7K3D0|G7K3D0_MEDTR | 4.00E-44 | Uncharacterized protein {ECO:0000313|EMBL:AET00408.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00145 | 295638 | 296229 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.872 |
| SRR1783600 | control | 2.003 |
| SRR1783602 | moderate drought stress | 2.361 |
| SRR1811619 | moderate drought stress | 2.112 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.344 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.813 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.734 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.143 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.270 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.430 |
| SRR2868004 | Drought Stress (root) | 15.109 |
| SRR2967015 | Control (root) | 17.788 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.999 |
| SRR9715740 | Leaf | 0.680 |
| SRR9715741 | Leaf | 0.522 |
| SRR9715739 | Root | 5.175 |
| SRR9715742 | Root | 2.440 |
| SRR9715743 | Root | 3.937 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.743 |
| SRR8749028 | MeJA induced 9h | 4.811 |
| SRR8749029 | MeJA induced 9h | 16.797 |
| SRR8749030 | Uninduced | 0.212 |
| SRR8749031 | Uninduced | 0.639 |
| SRR8749032 | Uninduced | 1.846 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.828 |
| SRR8400027 | Control - Root | 10.082 |