Gene detail information of Glyur000145s00010144


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G02485.13.00E-492-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
NRXP_003545074.29.95E-100PREDICTED: uncharacterized protein LOC100805644 [Glycine max]
COGYP_007149328.15.00E-18alkylated DNA repair protein [Cylindrospermum stagnale PCC 7417]
trEMBLtr|I1M6V8|I1M6V8_SOYBN4.00E-100Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G03010.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00145169299170015+


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000145s00010144.1PF13532.12OG-FeII_Oxy_2962327.80E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control32.211
SRR1783600control31.792
SRR1783602moderate drought stress54.844
SRR1811619moderate drought stress46.033

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain28.723
DRR006520Root Summer glycyrrhizin high producing strain22.387
DRR006521Root Winter glycyrrhizin high producing strain73.611
DRR006522Root Winter glycyrrhizin high producing strain64.112
DRR006523Root Summer glycyrrhizin low producing strain27.563
DRR006524Root Summer glycyrrhizin low producing strain31.700
DRR006525Leaf Summer glycyrrhizin high producing strain11.697
DRR006526Leaf Summer glycyrrhizin high producing strain12.566

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)29.496
SRR2868004Drought Stress (root)37.552
SRR2967015Control (root)30.474

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf13.239
SRR9715740Leaf10.908
SRR9715741Leaf9.306
SRR9715739Root26.115
SRR9715742Root19.747
SRR9715743Root17.530

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h30.287
SRR8749028MeJA induced 9h11.663
SRR8749029MeJA induced 9h12.828
SRR8749030Uninduced7.141
SRR8749031Uninduced1.394
SRR8749032Uninduced4.034

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root38.488
SRR8400027Control - Root31.784

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved