Gene detail information of Glyur000145s00010135 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G55460.1 | 7.00E-154 | DNA/RNA-binding protein Kin17, conserved region |
| NR | KHN38299.1 | 0 | DNA/RNA-binding protein KIN17 [Glycine soja] |
| trEMBL | tr|K7KBE6|K7KBE6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G45820.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00145 | 123807 | 125003 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000145s00010135.1 | PF10357.4 | Kin17_mid | 52 | 178 | 1.10E-45 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.611 |
| SRR1783600 | control | 16.759 |
| SRR1783602 | moderate drought stress | 11.610 |
| SRR1811619 | moderate drought stress | 11.953 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.899 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.991 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 30.466 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 28.149 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.660 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.694 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.730 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.593 |
| SRR2868004 | Drought Stress (root) | 35.999 |
| SRR2967015 | Control (root) | 37.080 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.532 |
| SRR9715740 | Leaf | 16.837 |
| SRR9715741 | Leaf | 20.955 |
| SRR9715739 | Root | 2.166 |
| SRR9715742 | Root | 14.756 |
| SRR9715743 | Root | 12.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 50.390 |
| SRR8749028 | MeJA induced 9h | 45.480 |
| SRR8749029 | MeJA induced 9h | 55.691 |
| SRR8749030 | Uninduced | 44.543 |
| SRR8749031 | Uninduced | 84.516 |
| SRR8749032 | Uninduced | 46.787 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.288 |
| SRR8400027 | Control - Root | 21.261 |