Gene detail

Gene detail information of Glyur000145s00010129

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G61800.1	3.00E-151	glucose-6-phosphate/phosphate translocator 2
NR	XP_007142250.1	0	hypothetical protein PHAVU_008G265100g [Phaseolus vulgaris]
Swissprot	tr\|Q94B38\|GPT2_ARATH	0	Glucose-6-phosphate/phosphate translocator 2, chloroplastic (Precursor)
trEMBL	tr\|V7B8W1\|V7B8W1_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW14244.1}

Sequence

Transcript Sequence

>Glyur000145s00010129.1
AACCAAACTTGTTGAAGGAAAAAAAAAAGCAGTTGAAAACAGAGAAAAAAAAACCCGCAACTACTAAAGTAACTAATTTGGATTTGCACAAACCTTTCGAGATCTCAATAGGGCATCACGTCAAAGGGCAGATCACAGAGACATTCTTTTATTATCACGCTTGATAGTGTTCAGTCCGTGAGAGAGTTCACTTCACGGCTNTGACACTGACACACACGCACGCACAAACAGGATCTCTCTATTATTTTTATTTCTTCTGGTTCTCCCTTCTCAATTATTTAGCAACTACCCATTAATCCTTTGGTCGAAAAGTTTAGATTTTTAATTTCATCACAATGATCTGCACCGTGAAACATCCTGGTATCTCGATCATAGGTTCTGATGTTGTTGTTTCACGGAAAAGGGGTTCAACTTCAACCCTTGTTTTGTCTTCCATCCCAAGAGAAAAGGCTCAGGGATCTCTGAAACTTTCAGTGCAAAAGCCACTGCACCTTTCATGTGTTGGGGGTTTTGTTGGGTCATCAGTGAGGCGTNAAAGGAGTGATTTTGTGACACGTGGAGCGTATGAGGCAGATAGATCAGAGGTNGAGGGAGCACCTGGGGCTGCTCCATCAGAGGCTGCTAAGAAGGTGAAAATTGGGATATACTTTGCAACCTGGTGGGCTCTGAATGTGGTGTTCAATATTTATAACAAGAAGGTTCTGAATGCATACCCTTACCCTTGGCTTACTTCAACTCTCTCCCTTGCATGTGGCTCTCTNATGATGTTGATCTCATGGGCCACCAGGATTGCTGAGGCTCCTAAGACTGATCTTGAGTTTTGGAAGACTTTGTTCCCTGTAGCTGTTGCACATACAATAGGACATGTGGCTGCAACTGTTAGCATGTCAAAAGTTGCAGTTTCATTCACCCATATTATCAAGAGTGGAGAGCCTGCTTTCAGTGTACTGGTTTCCAGATTTCTTTTGGGTGAAACCTTTCCAGTACCAGTCTATCTGTCTCTGATCCCAATCATTGGTGGATGTGCACTTTCTGCTCTTACTGAGCTCAATTTCAATATGACTGGTTTCATGGGGGCTATGATATCAAACTTGGCGTTTGTATTTCGTAATATCTTTTCAAAAAAGGGCATGAAGGGAAAGTCTGTCAGCGGAATGAATTACTACGCCTGTTTATCTATGTTGTCCCTGTTAATTCTCACACCTTTTGCATTTGCCGTGGAGGGACCACAGATGTGGGCAGCTGGGTGGCAAACAGCCCTCTCTCAAATTGGACCCCAATTTATATGGTGGGTGGCGGCTCAGAGCATATTTTATCATCTCTACAATCAGGTGTCATACATGTCTCTTGATCAGATCTCTCCCTTGACATTTAGCATTGGAAACACCATGAAACGCATATCGGTTATAGTTTCTTCGATCATTATCTTCCACACACCAGTTCGGCCCGTCAATGCTCTTGGAGCTGCTATTGCCATCCTTGGAACTTTCTTGTATTCACAGGCAAAGCAATAGTGAGTGTTCTTCCGAGAAGTTAAGAATCATCCTCTTGGAACTTTTATTTTTCTTTTAGCCTTTGGCCATACTCAGTTACTGATAAGCAAGTTGATTTTGAAATGGGACGGCTGGATTTTGGTAAAGACTATATGATTCAGCTGTTTCTCTATGTCATTATCATTATATGGATGATTAGTTTTTTTTAACTCTGGATAATCGTAAAGGAATAAACATTATCATAGTCCAAGTATGGTGATCTATTTGATGCTGGTCATGATTCGCATAATAATATTATTAATTAATGTTTGCCGACACTAGTGAAGATGCAGCTTGAGGTTTAATTTAATATTTCAGAGCATTTTCTTTCTTTAAATTAAATTAGCTTTTGCATAAGCAGATGGAGGCGCATTTAGGCCTTCGAGGCAATTAGCCGCCCCTTTAACATGATGTGTTTTTGTGACGATTGCTCACACCTAACACTAGCCATAACCATAAGACATCATGNTATGATAATAAACATTAATTTGGGGTTGGTGGGAGTGAGTCAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00145	88552	93108	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006810 transport

cellular_component

GO:0016020 membrane

GO:0016021 integral component of membrane

molecular_function
GO:0005215 transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000145s00010129.1	PF00892.15	EamA	116	233	1.10E-08
Glyur000145s00010129.1	PF03151.11	TPT	244	388	7.70E-37

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	103.450
SRR1783600	control	103.623
SRR1783602	moderate drought stress	56.931
SRR1811619	moderate drought stress	56.086

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	97.313
DRR006520	Root Summer glycyrrhizin high producing strain	96.583
DRR006521	Root Winter glycyrrhizin high producing strain	16.338
DRR006522	Root Winter glycyrrhizin high producing strain	15.776
DRR006523	Root Summer glycyrrhizin low producing strain	79.803
DRR006524	Root Summer glycyrrhizin low producing strain	80.208
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.775
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.621

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	128.066
SRR2868004	Drought Stress (root)	119.789
SRR2967015	Control (root)	108.882

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	14.470
SRR9715740	Leaf	12.523
SRR9715741	Leaf	13.773
SRR9715739	Root	118.369
SRR9715742	Root	104.213
SRR9715743	Root	103.453

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	39.950
SRR8749028	MeJA induced 9h	37.924
SRR8749029	MeJA induced 9h	34.083
SRR8749030	Uninduced	12.511
SRR8749031	Uninduced	6.076
SRR8749032	Uninduced	8.059

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	149.201
SRR8400027	Control - Root	176.152