Gene detail information of Glyur000144s00012246 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G04760.1 | 6.00E-07 | Duplicated homeodomain-like superfamily protein |
| NR | XP_003591316.1 | 2.09E-39 | hypothetical protein MTR_1g086180 [Medicago truncatula] |
| Swissprot | tr|Q58FS3|RAD_ANTMA | 1.00E-09 | Transcription factor RADIALIS |
| trEMBL | tr|G7IBR6|G7IBR6_MEDTR | 8.00E-40 | MYB family transcription factor {ECO:0000313|EMBL:AES61567.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00144 | 267353 | 267673 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.727 |
| SRR1783600 | control | 0.661 |
| SRR1783602 | moderate drought stress | 0.589 |
| SRR1811619 | moderate drought stress | 0.839 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.079 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.324 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.054 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.834 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.075 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.927 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 120.478 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 120.646 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.636 |
| SRR2868004 | Drought Stress (root) | 74.650 |
| SRR2967015 | Control (root) | 33.797 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 40.365 |
| SRR9715740 | Leaf | 67.420 |
| SRR9715741 | Leaf | 36.056 |
| SRR9715739 | Root | 0.369 |
| SRR9715742 | Root | 0.624 |
| SRR9715743 | Root | 0.336 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.931 |
| SRR8749028 | MeJA induced 9h | 27.072 |
| SRR8749029 | MeJA induced 9h | 8.254 |
| SRR8749030 | Uninduced | 164.419 |
| SRR8749031 | Uninduced | 69.235 |
| SRR8749032 | Uninduced | 37.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 127.076 |
| SRR8400027 | Control - Root | 124.521 |