Gene detail information of Glyur000144s00012234 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G47115.1 | 3.00E-67 | |
| NR | XP_006588555.1 | 7.52E-168 | PREDICTED: uncharacterized protein LOC100775788 [Glycine max] |
| trEMBL | tr|K7LGS6|K7LGS6_SOYBN | 3.00E-168 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G01241.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00144 | 196597 | 201089 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.931 |
| SRR1783600 | control | 1.850 |
| SRR1783602 | moderate drought stress | 1.027 |
| SRR1811619 | moderate drought stress | 1.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.157 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.228 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.401 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.981 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.370 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.308 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.682 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.523 |
| SRR2868004 | Drought Stress (root) | 7.469 |
| SRR2967015 | Control (root) | 6.235 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.023 |
| SRR9715740 | Leaf | 13.664 |
| SRR9715741 | Leaf | 9.734 |
| SRR9715739 | Root | 0.746 |
| SRR9715742 | Root | 0.507 |
| SRR9715743 | Root | 0.680 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.364 |
| SRR8749028 | MeJA induced 9h | 36.517 |
| SRR8749029 | MeJA induced 9h | 67.839 |
| SRR8749030 | Uninduced | 53.831 |
| SRR8749031 | Uninduced | 119.822 |
| SRR8749032 | Uninduced | 145.679 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.518 |
| SRR8400027 | Control - Root | 1.975 |