Gene detail information of Glyur000144s00012231 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G45580.1 | 3.00E-29 | cytochrome P450, family 76, subfamily C, polypeptide 3 |
| NR | XP_003533638.1 | 1.56E-39 | PREDICTED: geraniol 8-hydroxylase-like [Glycine max] |
| COG | YP_007142312.1 | 1.00E-11 | (+)-abscisic acid 8'-hydroxylase [Crinalium epipsammum PCC 9333] |
| Swissprot | tr|O64638|C76C3_ARATH | 8.00E-33 | Cytochrome P450 76C3 |
| trEMBL | tr|I1JKJ6|I1JKJ6_SOYBN | 6.00E-40 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G02410.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00144 | 181056 | 187920 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP76C3 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000144s00012231.1 | PF00067.17 | p450 | 1 | 86 | 9.70E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.231 |
| SRR1783600 | control | 0.208 |
| SRR1783602 | moderate drought stress | 0.198 |
| SRR1811619 | moderate drought stress | 0.468 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.425 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.638 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.759 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.775 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.535 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.839 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.087 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.825 |
| SRR2868004 | Drought Stress (root) | 2.956 |
| SRR2967015 | Control (root) | 2.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.020 |
| SRR9715740 | Leaf | 0.360 |
| SRR9715741 | Leaf | 0.549 |
| SRR9715739 | Root | 0.764 |
| SRR9715742 | Root | 0.928 |
| SRR9715743 | Root | 1.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.094 |
| SRR8749028 | MeJA induced 9h | 7.452 |
| SRR8749029 | MeJA induced 9h | 3.134 |
| SRR8749030 | Uninduced | 13.413 |
| SRR8749031 | Uninduced | 7.070 |
| SRR8749032 | Uninduced | 6.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.019 |
| SRR8400027 | Control - Root | 0.874 |