Gene detail information of Glyur000144s00012209 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G01935.1 | 1.00E-52 | |
| NR | KHN08619.1 | 8.49E-102 | hypothetical protein glysoja_024528 [Glycine soja] |
| trEMBL | tr|I1JBD8|I1JBD8_SOYBN | 6.00E-101 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G01350.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00144 | 54423 | 56539 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.416 |
| SRR1783600 | control | 0.503 |
| SRR1783602 | moderate drought stress | 1.338 |
| SRR1811619 | moderate drought stress | 1.279 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.761 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.022 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.454 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.320 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.396 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.416 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 40.076 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 39.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.188 |
| SRR2868004 | Drought Stress (root) | 2.715 |
| SRR2967015 | Control (root) | 1.414 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.884 |
| SRR9715740 | Leaf | 29.144 |
| SRR9715741 | Leaf | 19.438 |
| SRR9715739 | Root | 0.712 |
| SRR9715742 | Root | 1.243 |
| SRR9715743 | Root | 0.817 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.303 |
| SRR8749028 | MeJA induced 9h | 0.138 |
| SRR8749029 | MeJA induced 9h | 0.181 |
| SRR8749030 | Uninduced | 0.126 |
| SRR8749031 | Uninduced | 0.050 |
| SRR8749032 | Uninduced | 0.149 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.338 |
| SRR8400027 | Control - Root | 4.028 |