Gene detail information of Glyur000144s00012202 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G47260.1 | 7.00E-14 | WRKY DNA-binding protein 23 |
| NR | AJB84597.1 | 1.08E-73 | WRKY [Glycine max] |
| Swissprot | tr|O22900|WRK23_ARATH | 6.00E-17 | Probable WRKY transcription factor 23 |
| trEMBL | tr|C6TF82|C6TF82_SOYBN | 7.00E-74 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU20484.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00144 | 11556 | 13303 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000144s00012202.1 | PF03106.10 | WRKY | 145 | 171 | 3.70E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 49.561 |
| SRR1783600 | control | 52.424 |
| SRR1783602 | moderate drought stress | 58.636 |
| SRR1811619 | moderate drought stress | 58.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 56.922 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 54.925 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 209.076 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 200.590 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 75.074 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 75.016 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.682 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.069 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 84.968 |
| SRR2868004 | Drought Stress (root) | 82.192 |
| SRR2967015 | Control (root) | 120.560 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 55.980 |
| SRR9715740 | Leaf | 43.394 |
| SRR9715741 | Leaf | 113.068 |
| SRR9715739 | Root | 39.299 |
| SRR9715742 | Root | 64.621 |
| SRR9715743 | Root | 52.662 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 291.831 |
| SRR8749028 | MeJA induced 9h | 329.765 |
| SRR8749029 | MeJA induced 9h | 379.067 |
| SRR8749030 | Uninduced | 146.906 |
| SRR8749031 | Uninduced | 219.066 |
| SRR8749032 | Uninduced | 229.943 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 123.431 |
| SRR8400027 | Control - Root | 110.443 |