Gene detail information of Glyur000143s00011221 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003611066.1 | 6.26E-39 | hypothetical protein MTR_5g010040 [Medicago truncatula] |
| trEMBL | tr|G7KC08|G7KC08_MEDTR | 2.00E-39 | Uncharacterized protein {ECO:0000313|EMBL:AES94024.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00143 | 230424 | 232445 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.424 |
| SRR1783600 | control | 10.415 |
| SRR1783602 | moderate drought stress | 16.913 |
| SRR1811619 | moderate drought stress | 16.647 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 62.769 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 61.923 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 81.801 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 78.910 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 46.496 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 45.770 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.653 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.610 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.459 |
| SRR2868004 | Drought Stress (root) | 9.668 |
| SRR2967015 | Control (root) | 8.984 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.782 |
| SRR9715740 | Leaf | 12.248 |
| SRR9715741 | Leaf | 11.847 |
| SRR9715739 | Root | 5.282 |
| SRR9715742 | Root | 11.431 |
| SRR9715743 | Root | 10.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.876 |
| SRR8749028 | MeJA induced 9h | 8.731 |
| SRR8749029 | MeJA induced 9h | 8.593 |
| SRR8749030 | Uninduced | 5.197 |
| SRR8749031 | Uninduced | 2.785 |
| SRR8749032 | Uninduced | 5.866 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.255 |
| SRR8400027 | Control - Root | 11.590 |