Gene detail information of Glyur000143s00011219 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G23496.1 | 3.00E-12 | SPIRAL1-like5 |
| NR | NP_001236360.1 | 6.12E-33 | uncharacterized protein LOC100526947 [Glycine max] |
| Swissprot | tr|Q9LE54|SP1L2_ARATH | 2.00E-16 | Protein SPIRAL1-like 2 |
| trEMBL | tr|C6T2U0|C6T2U0_SOYBN | 2.00E-33 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G02430.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00143 | 224666 | 225141 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.273 |
| SRR1783600 | control | 1.298 |
| SRR1783602 | moderate drought stress | 0.221 |
| SRR1811619 | moderate drought stress | 0.335 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.284 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.324 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.337 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.338 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.287 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.281 |
| SRR2868004 | Drought Stress (root) | 22.740 |
| SRR2967015 | Control (root) | 8.771 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.886 |
| SRR9715742 | Root | 2.806 |
| SRR9715743 | Root | 3.941 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.574 |
| SRR8400027 | Control - Root | 9.934 |