Gene detail information of Glyur000143s00011210 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007158533.1 | 2.24E-12 | hypothetical protein PHAVU_002G160100g [Phaseolus vulgaris] |
| trEMBL | tr|V7CK03|V7CK03_PHAVU | 8.00E-13 | Uncharacterized protein {ECO:0000313|EMBL:ESW30527.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00143 | 181042 | 182851 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.925 |
| SRR1783600 | control | 2.127 |
| SRR1783602 | moderate drought stress | 1.723 |
| SRR1811619 | moderate drought stress | 1.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.542 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.969 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.633 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.378 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.219 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.184 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.632 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.609 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.076 |
| SRR2868004 | Drought Stress (root) | 35.821 |
| SRR2967015 | Control (root) | 32.195 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.071 |
| SRR9715740 | Leaf | 1.688 |
| SRR9715741 | Leaf | 1.845 |
| SRR9715739 | Root | 2.051 |
| SRR9715742 | Root | 2.549 |
| SRR9715743 | Root | 4.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 33.716 |
| SRR8749028 | MeJA induced 9h | 87.778 |
| SRR8749029 | MeJA induced 9h | 83.137 |
| SRR8749030 | Uninduced | 110.589 |
| SRR8749031 | Uninduced | 166.744 |
| SRR8749032 | Uninduced | 99.806 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.839 |
| SRR8400027 | Control - Root | 8.619 |