Gene detail information of Glyur000143s00011195 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G41620.1 | 1.00E-127 | |
| NR | XP_004511537.1 | 0 | PREDICTED: uncharacterized protein At5g41620-like [Cicer arietinum] |
| Swissprot | tr|Q66GQ2|Y5162_ARATH | 9.00E-171 | Uncharacterized protein At5g41620 |
| trEMBL | tr|I1JAB4|I1JAB4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G43290.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00143 | 73306 | 77602 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 24.023 |
| SRR1783600 | control | 24.278 |
| SRR1783602 | moderate drought stress | 31.781 |
| SRR1811619 | moderate drought stress | 31.661 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.534 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.183 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.295 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.621 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.850 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.059 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.704 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.765 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.928 |
| SRR2868004 | Drought Stress (root) | 13.439 |
| SRR2967015 | Control (root) | 18.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.933 |
| SRR9715740 | Leaf | 3.646 |
| SRR9715741 | Leaf | 4.135 |
| SRR9715739 | Root | 2.752 |
| SRR9715742 | Root | 10.440 |
| SRR9715743 | Root | 8.624 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.761 |
| SRR8749028 | MeJA induced 9h | 12.157 |
| SRR8749029 | MeJA induced 9h | 12.634 |
| SRR8749030 | Uninduced | 3.068 |
| SRR8749031 | Uninduced | 1.800 |
| SRR8749032 | Uninduced | 3.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.823 |
| SRR8400027 | Control - Root | 19.465 |