Gene detail information of Glyur000142s00009134.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G31180.1 | 6.00E-55 | myb domain protein 14 |
| NR | KEH24596.1 | 6.70E-116 | myb transcription factor [Medicago truncatula] |
| Swissprot | tr|Q7XBH4|MYB4_ORYSJ | 7.00E-70 | Myb-related protein Myb4 |
| trEMBL | tr|A0A072U5D9|A0A072U5D9_MEDTR | 3.00E-116 | Myb transcription factor {ECO:0000313|EMBL:KEH24596.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00142 | 309237 | 310466 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000142s00009134.1 | PF00249.26 | Myb_DNA-binding | 24 | 71 | 2.60E-14 |
| Glyur000142s00009134.1 | PF00249.26 | Myb_DNA-binding | 77 | 128 | 6.40E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.052 |
| SRR1783600 | control | 0.099 |
| SRR1783602 | moderate drought stress | 0.185 |
| SRR1811619 | moderate drought stress | 0.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.223 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.231 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.150 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.147 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.149 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.875 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.347 |
| SRR2868004 | Drought Stress (root) | 0.856 |
| SRR2967015 | Control (root) | 0.338 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.440 |
| SRR9715740 | Leaf | 0.543 |
| SRR9715741 | Leaf | 0.694 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.241 |
| SRR9715743 | Root | 0.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.614 |
| SRR8749028 | MeJA induced 9h | 0.456 |
| SRR8749029 | MeJA induced 9h | 0.630 |
| SRR8749030 | Uninduced | 2.039 |
| SRR8749031 | Uninduced | 1.022 |
| SRR8749032 | Uninduced | 1.171 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.607 |
| SRR8400027 | Control - Root | 0.917 |