Gene detail information of Glyur000142s00009109 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G60860.1 | 2.00E-12 | SEC7-like guanine nucleotide exchange family protein |
| NR | XP_004510941.1 | 4.40E-18 | PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Cicer arietinum] |
| Swissprot | tr|Q9LZX8|BIG2_ARATH | 7.00E-14 | Brefeldin A-inhibited guanine nucleotide-exchange protein 2 |
| trEMBL | tr|A0A072TQB9|A0A072TQB9_MEDTR | 5.00E-18 | Brefeldin A-inhibited guanine nucleotide-exchange protein {ECO:0000313|EMBL:KEH19038.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00142 | 171194 | 171436 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.234 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.597 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.738 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.573 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.758 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 42.810 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 39.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.136 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.042 |
| SRR9715741 | Leaf | 0.234 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.770 |
| SRR8749029 | MeJA induced 9h | 0.722 |
| SRR8749030 | Uninduced | 3.774 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.990 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.000 |