Gene detail information of Glyur000142s00009105


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G64790.10ILITYHIA
NRKEH24611.10translational activator GCN1-like protein [Medicago truncatula]
trEMBLtr|A0A072U5F0|A0A072U5F0_MEDTR0Translational activator GCN1-like protein {ECO:0000313|EMBL:KEH24611.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00142143005167228+


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

molecular_function

GO:0005488  binding

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000142s00009105.1PF12074.3DUF35543426864.30E-36
Glyur000142s00009105.1PF13646.1HEAT_2144215345.90E-08
Glyur000142s00009105.1PF13646.1HEAT_2156616641.70E-06
Glyur000142s00009105.1PF02985.17HEAT172017490.0017
Glyur000142s00009105.1PF13513.1HEAT_EZ226823220.00041


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.777
SRR1783600control10.797
SRR1783602moderate drought stress16.047
SRR1811619moderate drought stress15.929

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.075
DRR006520Root Summer glycyrrhizin high producing strain10.836
DRR006521Root Winter glycyrrhizin high producing strain6.166
DRR006522Root Winter glycyrrhizin high producing strain6.034
DRR006523Root Summer glycyrrhizin low producing strain11.245
DRR006524Root Summer glycyrrhizin low producing strain11.306
DRR006525Leaf Summer glycyrrhizin high producing strain4.942
DRR006526Leaf Summer glycyrrhizin high producing strain4.980

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)28.942
SRR2868004Drought Stress (root)28.086
SRR2967015Control (root)29.420

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf10.967
SRR9715740Leaf12.333
SRR9715741Leaf14.079
SRR9715739Root4.670
SRR9715742Root33.351
SRR9715743Root28.294

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.673
SRR8749028MeJA induced 9h12.870
SRR8749029MeJA induced 9h6.890
SRR8749030Uninduced2.634
SRR8749031Uninduced2.545
SRR8749032Uninduced3.398

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root32.197
SRR8400027Control - Root32.397