Gene detail information of Glyur000142s00009105 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G64790.1 | 0 | ILITYHIA |
| NR | KEH24611.1 | 0 | translational activator GCN1-like protein [Medicago truncatula] |
| trEMBL | tr|A0A072U5F0|A0A072U5F0_MEDTR | 0 | Translational activator GCN1-like protein {ECO:0000313|EMBL:KEH24611.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00142 | 143005 | 167228 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000142s00009105.1 | PF12074.3 | DUF3554 | 342 | 686 | 4.30E-36 |
| Glyur000142s00009105.1 | PF13646.1 | HEAT_2 | 1442 | 1534 | 5.90E-08 |
| Glyur000142s00009105.1 | PF13646.1 | HEAT_2 | 1566 | 1664 | 1.70E-06 |
| Glyur000142s00009105.1 | PF02985.17 | HEAT | 1720 | 1749 | 0.0017 |
| Glyur000142s00009105.1 | PF13513.1 | HEAT_EZ | 2268 | 2322 | 0.00041 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.777 |
| SRR1783600 | control | 10.797 |
| SRR1783602 | moderate drought stress | 16.047 |
| SRR1811619 | moderate drought stress | 15.929 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.075 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.836 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.166 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.034 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.245 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.306 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.942 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.980 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.942 |
| SRR2868004 | Drought Stress (root) | 28.086 |
| SRR2967015 | Control (root) | 29.420 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.967 |
| SRR9715740 | Leaf | 12.333 |
| SRR9715741 | Leaf | 14.079 |
| SRR9715739 | Root | 4.670 |
| SRR9715742 | Root | 33.351 |
| SRR9715743 | Root | 28.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.673 |
| SRR8749028 | MeJA induced 9h | 12.870 |
| SRR8749029 | MeJA induced 9h | 6.890 |
| SRR8749030 | Uninduced | 2.634 |
| SRR8749031 | Uninduced | 2.545 |
| SRR8749032 | Uninduced | 3.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.197 |
| SRR8400027 | Control - Root | 32.397 |