Gene detail information of Glyur000142s00009101 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G18310.2 | 3.00E-14 | |
| NR | XP_004494766.1 | 7.00E-76 | PREDICTED: uncharacterized protein LOC101493502 isoform X3 [Cicer arietinum] |
| trEMBL | tr|I1NCG2|I1NCG2_SOYBN | 5.00E-75 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G44000.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00142 | 69694 | 71983 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 109.829 |
| SRR1783600 | control | 108.886 |
| SRR1783602 | moderate drought stress | 63.146 |
| SRR1811619 | moderate drought stress | 63.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 46.482 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 46.856 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.573 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.434 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 30.796 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.896 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.713 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 37.451 |
| SRR2868004 | Drought Stress (root) | 20.085 |
| SRR2967015 | Control (root) | 29.221 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.592 |
| SRR9715740 | Leaf | 2.549 |
| SRR9715741 | Leaf | 5.112 |
| SRR9715739 | Root | 51.388 |
| SRR9715742 | Root | 50.918 |
| SRR9715743 | Root | 53.585 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 289.590 |
| SRR8749028 | MeJA induced 9h | 118.576 |
| SRR8749029 | MeJA induced 9h | 74.590 |
| SRR8749030 | Uninduced | 8.122 |
| SRR8749031 | Uninduced | 0.503 |
| SRR8749032 | Uninduced | 1.926 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 92.955 |
| SRR8400027 | Control - Root | 102.072 |