Gene detail information of Glyur000142s00009096 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G06980.1 | 1.00E-05 | |
| NR | KHN35344.1 | 7.60E-76 | hypothetical protein glysoja_028974 [Glycine soja] |
| trEMBL | tr|I1JRV5|I1JRV5_SOYBN | 3.00E-76 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G41440.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00142 | 50410 | 51162 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000142s00009096.1 | PF14009.1 | DUF4228 | 10 | 159 | 9.10E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.776 |
| SRR1783600 | control | 7.619 |
| SRR1783602 | moderate drought stress | 17.329 |
| SRR1811619 | moderate drought stress | 17.611 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.892 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.193 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.905 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.247 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.797 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.983 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.620 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.215 |
| SRR2868004 | Drought Stress (root) | 2.385 |
| SRR2967015 | Control (root) | 4.584 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.402 |
| SRR9715740 | Leaf | 9.238 |
| SRR9715741 | Leaf | 11.695 |
| SRR9715739 | Root | 4.051 |
| SRR9715742 | Root | 4.107 |
| SRR9715743 | Root | 1.783 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.468 |
| SRR8749028 | MeJA induced 9h | 4.152 |
| SRR8749029 | MeJA induced 9h | 1.676 |
| SRR8749030 | Uninduced | 1.307 |
| SRR8749031 | Uninduced | 0.410 |
| SRR8749032 | Uninduced | 0.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.460 |
| SRR8400027 | Control - Root | 1.712 |